FFCP PHASE1:Hg19::chr20:4152356..4152363,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54498 | |EntrezGene=54498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15862 | |HGNC=15862 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWM0 | |UniProt=Q9NWM0 | ||
|association_with_transcript=0bp_to_ENST00000379460,uc002wko.1_5end | |association_with_transcript=0bp_to_ENST00000379460,uc002wko.1_5end | ||
|cluster_id=chr20:4152356..4152363,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_8_at_SMOX_5end | |description=CAGE_peak_8_at_SMOX_5end | ||
|id=chr20:4152356..4152363,+ | |id=chr20:4152356..4152363,+ | ||
|ontology_enrichment_celltype=CL:0000182;1.81e-30;12!CL:0000047;6.30e-21;2!CL:0002563;3.60e-11;4 | |ontology_enrichment_celltype=CL:0002563!4.26e-08!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.81e-30;12!CL:0000047;6.30e-21;2!CL:0002563;3.60e-11;4 | ||
|ontology_enrichment_disease=DOID:7;1.98e-10;39 | |ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-30,12;CL:0000223,1.28e-11,58;CL:0002563,3.79e-11,4 | ||
|ontology_enrichment_uberon=UBERON:0002107;1.31e-19;19!UBERON:0006925;1.31e-19;19!UBERON:0002423;3.99e-15;25!UBERON:0002365;1.84e-11;31!UBERON:0002330;1.84e-11;31!UBERON:0001242;3.60e-11;4!UBERON:0001262;3.60e-11;4!UBERON:0004786;3.60e-11;4!UBERON:0004808;3.60e-11;4!UBERON:0001277;3.60e-11;4!UBERON:0002368;8.13e-11;33!UBERON:0000949;1.70e-08;43!UBERON:0000485;6.21e-07;7!UBERON:0003929;6.21e-07;7 | |ontology_enrichment_development_v019=UBERON:0004161;3.85e-33;11!UBERON:0009497;3.33e-28;13!UBERON:0001041;9.49e-13;30!UBERON:0003104;4.18e-12;31!CL:0000223;2.38e-08;58 | ||
|ontology_enrichment_disease=DOID:4960!3.33e-08!1;DOID:0070004!3.33e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:7;1.98e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.37e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0003929!3.43e-09!54;UBERON:0001242!4.26e-08!4;UBERON:0001262!4.26e-08!4;UBERON:0004786!4.26e-08!4;UBERON:0004808!4.26e-08!4;UBERON:0001277!4.26e-08!4;UBERON:0002336!6.68e-08!1;UBERON:0001018!6.68e-08!1;UBERON:0002473!6.68e-08!1;UBERON:0005340!6.68e-08!1;UBERON:0002316!6.68e-08!1;UBERON:0003544!6.68e-08!1;UBERON:0001020!6.68e-08!1;UBERON:0005970!6.68e-08!1;UBERON:0002437!6.68e-08!1;UBERON:0002581!7.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.31e-19;19!UBERON:0006925;1.31e-19;19!UBERON:0002423;3.99e-15;25!UBERON:0002365;1.84e-11;31!UBERON:0002330;1.84e-11;31!UBERON:0001242;3.60e-11;4!UBERON:0001262;3.60e-11;4!UBERON:0004786;3.60e-11;4!UBERON:0004808;3.60e-11;4!UBERON:0001277;3.60e-11;4!UBERON:0002368;8.13e-11;33!UBERON:0000949;1.70e-08;43!UBERON:0000485;6.21e-07;7!UBERON:0003929;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.31e-19,19;UBERON:0006925,1.31e-19,19;UBERON:0008836,1.31e-19,19;UBERON:0008835,4.60e-17,22;UBERON:0003894,4.60e-17,22;UBERON:0009854,2.31e-16,23;UBERON:0007499,3.99e-15,25;UBERON:0009497,3.99e-15,25;UBERON:0000015,3.99e-15,25;UBERON:0002423,3.99e-15,25;UBERON:0006235,3.99e-15,25;UBERON:0004161,3.99e-15,25;UBERON:0009856,1.41e-14,26;UBERON:0003929,1.98e-12,54;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0001242,3.79e-11,4;UBERON:0001262,3.79e-11,4;UBERON:0004786,3.79e-11,4;UBERON:0004808,3.79e-11,4;UBERON:0001277,3.79e-11,4;UBERON:0002368,4.78e-11,35;UBERON:0000949,9.12e-09,45;UBERON:0005911,2.09e-08,82;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0002530,7.38e-07,59;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60 | |||
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|short_description=p8@SMOX | |short_description=p8@SMOX | ||
}} | }} |
Latest revision as of 06:31, 16 September 2015
Short description: | p8@SMOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SMOX_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000379460, uc002wko.1_5end |
EntrezGene: | SMOX |
HGNC: | 15862 |
UniProt: | Q9NWM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-30 | 12 |
endodermal cell | 1.28e-11 | 58 |
intestinal epithelial cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 1.31e-19 | 19 |
digestive gland | 1.31e-19 | 19 |
liver bud | 1.31e-19 | 19 |
hepatic diverticulum | 4.60e-17 | 22 |
liver primordium | 4.60e-17 | 22 |
digestive tract diverticulum | 2.31e-16 | 23 |
epithelial sac | 3.99e-15 | 25 |
epithelium of foregut-midgut junction | 3.99e-15 | 25 |
anatomical boundary | 3.99e-15 | 25 |
hepatobiliary system | 3.99e-15 | 25 |
foregut-midgut junction | 3.99e-15 | 25 |
septum transversum | 3.99e-15 | 25 |
sac | 1.41e-14 | 26 |
gut epithelium | 1.98e-12 | 54 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
intestinal mucosa | 3.79e-11 | 4 |
wall of intestine | 3.79e-11 | 4 |
gastrointestinal system mucosa | 3.79e-11 | 4 |
gastrointestinal system epithelium | 3.79e-11 | 4 |
intestinal epithelium | 3.79e-11 | 4 |
endocrine gland | 4.78e-11 | 35 |
endocrine system | 9.12e-09 | 45 |
endo-epithelium | 2.09e-08 | 82 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
gland | 7.38e-07 | 59 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.37e-10 | 39 |