FFCP PHASE1:Hg19::chr2:128784846..128784886,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79595 | |EntrezGene=79595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29813 | |HGNC=29813 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0E3,B7ZLM3,C9J683 | |UniProt=Q9H0E3,B7ZLM3,C9J683 | ||
|association_with_transcript=0bp_to_ENST00000259235,ENST00000357702,ENST00000424298,NM_001145928,NM_024545,uc002tpp.2,uc010fmd.2_5end | |association_with_transcript=0bp_to_ENST00000259235,ENST00000357702,ENST00000424298,NM_001145928,NM_024545,uc002tpp.2,uc010fmd.2_5end | ||
|cluster_id=chr2:128784846..128784886,- | |||
|description=CAGE_peak_3_at_SAP130_5end | |description=CAGE_peak_3_at_SAP130_5end | ||
|id=chr2:128784846..128784886,- | |id=chr2:128784846..128784886,- | ||
|ontology_enrichment_celltype=CL:0002321!2.73e-07!248;CL:0000220!6.40e-07!246 | |ontology_enrichment_celltype=CL:0002321!2.73e-07!248;CL:0000220!6.40e-07!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.17e-07,250;CL:0000115,7.64e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.90e-09!94;UBERON:0001016!7.90e-09!94;UBERON:0000119!1.57e-08!312;UBERON:0000483!3.80e-08!309;UBERON:0005743!4.05e-08!86;UBERON:0001017!1.57e-07!82;UBERON:0000924!3.65e-07!173;UBERON:0006601!3.65e-07!173;UBERON:0004121!4.83e-07!169 | |ontology_enrichment_uberon=UBERON:0000073!7.90e-09!94;UBERON:0001016!7.90e-09!94;UBERON:0000119!1.57e-08!312;UBERON:0000483!3.80e-08!309;UBERON:0005743!4.05e-08!86;UBERON:0001017!1.57e-07!82;UBERON:0000924!3.65e-07!173;UBERON:0006601!3.65e-07!173;UBERON:0004121!4.83e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.56e-09,89;UBERON:0000119,1.15e-08,309;UBERON:0004121,2.28e-08,171;UBERON:0000924,2.28e-08,171;UBERON:0006601,2.28e-08,171;UBERON:0000483,2.80e-08,306;UBERON:0001017,3.45e-08,81;UBERON:0000955,8.89e-07,68;UBERON:0006238,8.89e-07,68 | |||
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| ||
|short_description=p3@SAP130 | |short_description=p3@SAP130 | ||
}} | }} |
Latest revision as of 21:50, 16 September 2015
Short description: | p3@SAP130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SAP130_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000259235, ENST00000357702, ENST00000424298, NM_001145928, NM_024545, uc002tpp.2, uc010fmd.2_5end |
EntrezGene: | SAP130 |
HGNC: | 29813 |
UniProt: | Q9H0E3B7ZLM3C9J683 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.17e-07 | 250 |
endothelial cell | 7.64e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.56e-09 | 89 |
cell layer | 1.15e-08 | 309 |
ectoderm-derived structure | 2.28e-08 | 171 |
ectoderm | 2.28e-08 | 171 |
presumptive ectoderm | 2.28e-08 | 171 |
epithelium | 2.80e-08 | 306 |
central nervous system | 3.45e-08 | 81 |
brain | 8.89e-07 | 68 |
future brain | 8.89e-07 | 68 |