FFCP PHASE1:Hg19::chr22:31518734..31518756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27124 | |EntrezGene=27124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8956 | |HGNC=8956 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000463528_5end | |association_with_transcript=17bp_to_ENST00000463528_5end | ||
|cluster_id=chr22:31518734..31518756,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_2_at_INPP5J_5end | |description=CAGE_peak_2_at_INPP5J_5end | ||
|id=chr22:31518734..31518756,+ | |id=chr22:31518734..31518756,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.69e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.22e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.64e-07;4!DOID:1612;1.64e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.69e-07,4;DOID:1612,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.39e-21!27;UBERON:0000059!6.76e-18!11;UBERON:0005409!1.74e-16!35;UBERON:0001155!1.86e-14!9;UBERON:0001007!3.27e-11!155;UBERON:0001555!3.27e-11!155;UBERON:0007026!3.27e-11!155;UBERON:0004119!4.99e-10!169;UBERON:0000925!4.99e-10!169;UBERON:0006595!4.99e-10!169;UBERON:0001154!3.05e-09!1;UBERON:0001153!3.05e-09!1;UBERON:0001000!3.31e-09!1;UBERON:0005352!3.31e-09!1;UBERON:0004921!3.89e-09!129;UBERON:0004185!3.89e-09!129;UBERON:0002046!3.68e-07!5;UBERON:0004117!3.68e-07!5;UBERON:0007689!3.68e-07!5;UBERON:0007123!3.68e-07!5;UBERON:0003091!3.68e-07!5;UBERON:0004907!3.92e-07!5 | |ontology_enrichment_uberon=UBERON:0000160!1.39e-21!27;UBERON:0000059!6.76e-18!11;UBERON:0005409!1.74e-16!35;UBERON:0001155!1.86e-14!9;UBERON:0001007!3.27e-11!155;UBERON:0001555!3.27e-11!155;UBERON:0007026!3.27e-11!155;UBERON:0004119!4.99e-10!169;UBERON:0000925!4.99e-10!169;UBERON:0006595!4.99e-10!169;UBERON:0001154!3.05e-09!1;UBERON:0001153!3.05e-09!1;UBERON:0001000!3.31e-09!1;UBERON:0005352!3.31e-09!1;UBERON:0004921!3.89e-09!129;UBERON:0004185!3.89e-09!129;UBERON:0002046!3.68e-07!5;UBERON:0004117!3.68e-07!5;UBERON:0007689!3.68e-07!5;UBERON:0007123!3.68e-07!5;UBERON:0003091!3.68e-07!5;UBERON:0004907!3.92e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.17e-49;17!UBERON:0002108;3.46e-45;4!UBERON:0005409;9.65e-39;22!UBERON:0001155;2.27e-25;9!UBERON:0004921;1.45e-23;33!UBERON:0000059;6.54e-21;11!UBERON:0001555;9.61e-10;54!UBERON:0002114;1.35e-09;2!UBERON:0001911;1.64e-07;4!UBERON:0000922;7.83e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-49,17;UBERON:0002108,4.03e-45,4;UBERON:0005409,2.44e-34,25;UBERON:0001155,1.92e-25,9;UBERON:0000059,5.70e-21,11;UBERON:0002114,1.54e-09,2;UBERON:0004921,1.33e-07,118;UBERON:0001911,1.69e-07,4;UBERON:0005333,1.69e-07,4;UBERON:0008425,1.69e-07,4;UBERON:0005311,1.69e-07,4 | |||
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|short_description=p2@INPP5J | |short_description=p2@INPP5J | ||
}} | }} |
Latest revision as of 19:34, 19 September 2015
Short description: | p2@INPP5J |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_INPP5J_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 17bp_to_ENST00000463528_5end |
EntrezGene: | INPP5J |
HGNC: | 8956 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.99e-49 | 17 |
small intestine | 4.03e-45 | 4 |
gastrointestinal system | 2.44e-34 | 25 |
colon | 1.92e-25 | 9 |
large intestine | 5.70e-21 | 11 |
duodenum | 1.54e-09 | 2 |
subdivision of digestive tract | 1.33e-07 | 118 |
mammary gland | 1.69e-07 | 4 |
mammary bud | 1.69e-07 | 4 |
mammary ridge | 1.69e-07 | 4 |
mammary placode | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.69e-07 | 4 |
breast cancer | 1.69e-07 | 4 |