FFCP PHASE1:Hg19::chr1:156786243..156786257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9047 | |EntrezGene=9047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10821 | |HGNC=10821 | ||
|TSSclassifier=strong | |||
|UniProt=Q5UBZ3,Q9NP31 | |UniProt=Q5UBZ3,Q9NP31 | ||
|association_with_transcript=-304bp_to_NM_001161443,uc001fqc.1_5end | |association_with_transcript=-304bp_to_NM_001161443,uc001fqc.1_5end | ||
|cluster_id=chr1:156786243..156786257,- | |||
|coexpression_cluster_id=C137 | |coexpression_cluster_id=C137 | ||
|description=CAGE_peak_6_at_SH2D2A_5end | |description=CAGE_peak_6_at_SH2D2A_5end | ||
|id=chr1:156786243..156786257,- | |id=chr1:156786243..156786257,- | ||
|ontology_enrichment_celltype=CL:0002621!6.16e-12!3;CL:0000317!1.11e-08!2;CL:1000448!1.11e-08!2;CL:0002308!1.11e-08!2;CL:0002140!1.11e-08!2;CL:0002274!7.37e-07!5;CL:0000457!7.37e-07!5;CL:0002191!7.37e-07!5;CL:0000097!7.37e-07!5;CL:0000831!7.37e-07!5;CL:0002028!7.37e-07!5 | |ontology_enrichment_celltype=CL:0002621!6.16e-12!3;CL:0000317!1.11e-08!2;CL:1000448!1.11e-08!2;CL:0002308!1.11e-08!2;CL:0002140!1.11e-08!2;CL:0002274!7.37e-07!5;CL:0000457!7.37e-07!5;CL:0002191!7.37e-07!5;CL:0000097!7.37e-07!5;CL:0000831!7.37e-07!5;CL:0002028!7.37e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000771;4.89e-09;2!CL:0000317;7.49e-09;2!CL:1000448;7.49e-09;2!CL:0002308;7.49e-09;2!CL:0002140;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,5.08e-09,2;CL:0000317,6.42e-09,2;CL:1000448,6.42e-09,2;CL:0002308,6.42e-09,2;CL:0002140,6.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!6.17e-08!2;DOID:1036!2.79e-07!8 | |ontology_enrichment_disease=DOID:1909!6.17e-08!2;DOID:1036!2.79e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.31e-16;1!DOID:0060061;1.31e-16;1!DOID:8691;1.31e-16;1!DOID:0060058;5.34e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.21e-16,1;DOID:0060061,1.21e-16,1;DOID:8691,1.21e-16,1;DOID:0060058,5.43e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001949!6.16e-12!3;UBERON:0001905!4.65e-09!2;UBERON:0002757!4.65e-09!2;UBERON:0010134!4.65e-09!2;UBERON:0002784!4.65e-09!2;UBERON:0005408!4.65e-09!2;UBERON:0001899!4.65e-09!2;UBERON:0002419!1.11e-08!2;UBERON:0007771!1.11e-08!2;UBERON:0003297!1.11e-08!2;UBERON:0001821!1.11e-08!2;UBERON:0003487!1.11e-08!2;UBERON:0001820!1.11e-08!2;UBERON:0005089!1.11e-08!2;UBERON:0005088!1.11e-08!2 | |ontology_enrichment_uberon=UBERON:0001949!6.16e-12!3;UBERON:0001905!4.65e-09!2;UBERON:0002757!4.65e-09!2;UBERON:0010134!4.65e-09!2;UBERON:0002784!4.65e-09!2;UBERON:0005408!4.65e-09!2;UBERON:0001899!4.65e-09!2;UBERON:0002419!1.11e-08!2;UBERON:0007771!1.11e-08!2;UBERON:0003297!1.11e-08!2;UBERON:0001821!1.11e-08!2;UBERON:0003487!1.11e-08!2;UBERON:0001820!1.11e-08!2;UBERON:0005089!1.11e-08!2;UBERON:0005088!1.11e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.59e-32;2!UBERON:0002757;4.59e-32;2!UBERON:0010134;4.59e-32;2!UBERON:0005408;4.59e-32;2!UBERON:0001899;4.59e-32;2!UBERON:0003296;1.42e-16;4!UBERON:0010133;1.42e-16;4!UBERON:0002784;1.42e-16;4!UBERON:0001894;7.00e-10;7!UBERON:0002419;7.49e-09;2!UBERON:0007771;7.49e-09;2!UBERON:0003297;7.49e-09;2!UBERON:0001821;7.49e-09;2!UBERON:0003487;7.49e-09;2!UBERON:0001820;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.59e-32,2;UBERON:0002757,4.59e-32,2;UBERON:0010134,4.59e-32,2;UBERON:0005408,4.59e-32,2;UBERON:0001899,4.59e-32,2;UBERON:0003296,1.42e-16,4;UBERON:0010133,1.42e-16,4;UBERON:0002784,1.42e-16,4;UBERON:0001894,7.00e-10,7;UBERON:0006222,7.00e-10,7;UBERON:0002419,6.42e-09,2;UBERON:0007771,6.42e-09,2;UBERON:0003297,6.42e-09,2;UBERON:0001821,6.42e-09,2;UBERON:0003487,6.42e-09,2;UBERON:0001820,6.42e-09,2;UBERON:0005089,6.42e-09,2;UBERON:0005088,6.42e-09,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,5.41929561685538,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.788123040807709,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89768643453339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15362711958732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,2.82564461511045,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0.494255755786011,0.835375596043643,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.7706142678153,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99981093782395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2849174962104,34.6372233885389,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@SH2D2A | |short_description=p6@SH2D2A | ||
}} | }} |
Latest revision as of 18:24, 17 September 2015
Short description: | p6@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SH2D2A_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -304bp_to_NM_001161443, uc001fqc.1_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | Q5UBZ3Q9NP31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 5.08e-09 | 2 |
sebum secreting cell | 6.42e-09 | 2 |
epithelial cell of sweat gland | 6.42e-09 | 2 |
epithelial cell of skin gland | 6.42e-09 | 2 |
acinar cell of sebaceous gland | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.59e-32 | 2 |
regional part of epithalamus | 4.59e-32 | 2 |
secretory circumventricular organ | 4.59e-32 | 2 |
circumventricular organ | 4.59e-32 | 2 |
epithalamus | 4.59e-32 | 2 |
gland of diencephalon | 1.42e-16 | 4 |
neuroendocrine gland | 1.42e-16 | 4 |
regional part of diencephalon | 1.42e-16 | 4 |
diencephalon | 7.00e-10 | 7 |
future diencephalon | 7.00e-10 | 7 |
skin gland | 6.42e-09 | 2 |
epidermis gland | 6.42e-09 | 2 |
gland of integumental system | 6.42e-09 | 2 |
sebaceous gland | 6.42e-09 | 2 |
skin sebaceous gland | 6.42e-09 | 2 |
sweat gland | 6.42e-09 | 2 |
sweat gland placode | 6.42e-09 | 2 |
sebaceous gland placode | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.21e-16 | 1 |
cutaneous T cell lymphoma | 1.21e-16 | 1 |
mycosis fungoides | 1.21e-16 | 1 |
lymphoma | 5.43e-07 | 10 |