FFCP PHASE1:Hg19::chr12:117318788..117318818,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8739 | |EntrezGene=8739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5185 | |HGNC=5185 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000550505_5end | |association_with_transcript=74bp_to_ENST00000550505_5end | ||
|cluster_id=chr12:117318788..117318818,- | |||
|description=CAGE_peak_5_at_HRK_5end | |description=CAGE_peak_5_at_HRK_5end | ||
|id=chr12:117318788..117318818,- | |id=chr12:117318788..117318818,- | ||
|ontology_enrichment_celltype=CL:0000236!1.66e-21!14;CL:0000945!7.25e-15!24;CL:0000826!7.25e-15!24;CL:0000542!1.32e-07!53;CL:0000051!1.32e-07!53;CL:0000838!7.57e-07!52 | |ontology_enrichment_celltype=CL:0000236!1.66e-21!14;CL:0000945!7.25e-15!24;CL:0000826!7.25e-15!24;CL:0000542!1.32e-07!53;CL:0000051!1.32e-07!53;CL:0000838!7.57e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.52e-96;13!CL:0000945;3.56e-61;24!CL:0000542;6.05e-27;53!CL:0000785;2.63e-12;1!CL:0000819;2.63e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.07e-89,14;CL:0000945,2.73e-61,24;CL:0000826,2.73e-61,24;CL:0000542,1.41e-31,53;CL:0000051,1.41e-31,53;CL:0000838,1.96e-27,52;CL:0002087,1.05e-15,115;CL:0000738,5.59e-13,136;CL:0002031,8.38e-13,120;CL:0002032,2.16e-12,161;CL:0000837,2.16e-12,161;CL:0000819,2.63e-12,1;CL:0000037,8.74e-12,168;CL:0000988,4.48e-11,177;CL:0000785,8.93e-07,2;CL:0000955,8.93e-07,2;CL:0000818,8.93e-07,2;CL:0000954,8.93e-07,2;CL:0000816,8.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;6.05e-27;53!CL:0000954;8.93e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.63e-12;1!DOID:8675;2.63e-12;1!DOID:12603;1.32e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.63e-12,1;DOID:8675,2.63e-12,1;DOID:12603,1.63e-11,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.34e-22;2!UBERON:0005058;1.34e-22;2!UBERON:0009113;1.34e-22;2!UBERON:0004177;1.31e-09;5!UBERON:0005057;1.31e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.20e-12,4;UBERON:0005058,8.20e-12,4;UBERON:0009113,8.20e-12,4;UBERON:0003295,8.20e-12,4;UBERON:0005562,8.20e-12,4;UBERON:0003351,3.64e-08,6;UBERON:0004177,4.08e-07,7;UBERON:0005057,4.08e-07,7 | |||
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| ||
|short_description=p5@HRK | |short_description=p5@HRK | ||
}} | }} |
Latest revision as of 16:12, 16 September 2015
Short description: | p5@HRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HRK_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_ENST00000550505_5end |
EntrezGene: | HRK |
HGNC: | 5185 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.07e-89 | 14 |
lymphocyte of B lineage | 2.73e-61 | 24 |
pro-B cell | 2.73e-61 | 24 |
lymphocyte | 1.41e-31 | 53 |
common lymphoid progenitor | 1.41e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.96e-27 | 52 |
nongranular leukocyte | 1.05e-15 | 115 |
leukocyte | 5.59e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 8.38e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.16e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-12 | 161 |
B-1 B cell | 2.63e-12 | 1 |
hematopoietic stem cell | 8.74e-12 | 168 |
hematopoietic cell | 4.48e-11 | 177 |
mature B cell | 8.93e-07 | 2 |
pre-B-II cell | 8.93e-07 | 2 |
transitional stage B cell | 8.93e-07 | 2 |
small pre-B-II cell | 8.93e-07 | 2 |
immature B cell | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.20e-12 | 4 |
hemolymphoid system gland | 8.20e-12 | 4 |
thymic region | 8.20e-12 | 4 |
pharyngeal gland | 8.20e-12 | 4 |
thymus primordium | 8.20e-12 | 4 |
pharyngeal epithelium | 3.64e-08 | 6 |
hemopoietic organ | 4.08e-07 | 7 |
immune organ | 4.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.63e-12 | 1 |
lymphosarcoma | 2.63e-12 | 1 |
acute leukemia | 1.63e-11 | 1 |