FFCP PHASE1:Hg19::chr1:17906970..17906994,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:17906970..17906994,+
|short_description=p5@ARHGEF10L
|description=CAGE_peak_5_at_ARHGEF10L_5end
|association_with_transcript=-53bp_to_ENST00000375415,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55160 | |EntrezGene=55160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25540 | |HGNC=25540 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCE6 | |UniProt=Q9HCE6 | ||
|association_with_transcript=-53bp_to_ENST00000375415,NM_001011722,uc001bao.2,uc001bap.2_5end | |||
|cluster_id=chr1:17906970..17906994,+ | |||
|coexpression_cluster_id=C3909 | |||
|description=CAGE_peak_5_at_ARHGEF10L_5end | |||
|id=chr1:17906970..17906994,+ | |||
|ontology_enrichment_celltype=CL:1000507!5.72e-15!12;CL:1000494!5.72e-15!12;CL:0000181!2.36e-14!12;CL:0000417!2.36e-14!12;CL:0000668!2.36e-14!12;CL:0000414!2.36e-14!12;CL:0000412!2.36e-14!12;CL:0000182!2.36e-14!12;CL:1000497!2.58e-14!18;CL:0002518!2.58e-14!18;CL:1000449!8.51e-11!16;CL:0000223!7.50e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.80e-23;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.01e-22,12;CL:0000223,2.10e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.72e-20;13!UBERON:0004161;8.94e-19;11!UBERON:0003104;1.41e-14;31!UBERON:0001041;5.49e-08;30!UBERON:0003918;8.70e-07;10!UBERON:0007687;8.70e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.14e-21;19!UBERON:0006925;1.14e-21;19!UBERON:0005409;5.51e-20;22!UBERON:0002423;3.72e-19;25!UBERON:0000160;1.42e-17;17!UBERON:0002365;3.11e-12;31!UBERON:0002330;3.11e-12;31!UBERON:0005172;3.46e-12;52!UBERON:0005173;3.46e-12;52!UBERON:0004921;1.42e-11;33!UBERON:0002368;1.29e-10;33!UBERON:0001007;1.52e-09;81!UBERON:0000059;3.20e-09;11!UBERON:0002417;1.55e-08;58!UBERON:0000916;1.55e-08;58!UBERON:0002108;1.89e-08;4!UBERON:0000949;7.30e-08;43!UBERON:0001155;1.72e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.80e-25,23;UBERON:0008835,4.21e-22,22;UBERON:0003894,4.21e-22,22;UBERON:0002107,1.15e-21,19;UBERON:0006925,1.15e-21,19;UBERON:0008836,1.15e-21,19;UBERON:0009856,1.16e-21,26;UBERON:0007499,3.62e-19,25;UBERON:0009497,3.62e-19,25;UBERON:0000015,3.62e-19,25;UBERON:0002423,3.62e-19,25;UBERON:0006235,3.62e-19,25;UBERON:0004161,3.62e-19,25;UBERON:0005172,5.48e-19,54;UBERON:0005173,5.48e-19,54;UBERON:0000160,1.46e-17,17;UBERON:0005409,2.07e-17,25;UBERON:0002417,1.10e-16,60;UBERON:0000916,1.10e-16,60;UBERON:0004921,5.80e-15,118;UBERON:0002365,1.73e-12,31;UBERON:0002330,1.73e-12,31;UBERON:0001007,3.70e-11,145;UBERON:0001555,3.70e-11,145;UBERON:0007026,3.70e-11,145;UBERON:0003929,6.49e-11,54;UBERON:0002368,7.82e-11,35;UBERON:0000949,9.37e-10,45;UBERON:0004119,1.31e-09,160;UBERON:0000925,1.31e-09,160;UBERON:0006595,1.31e-09,160;UBERON:0005177,1.44e-09,101;UBERON:0000059,3.26e-09,11;UBERON:0002108,1.89e-08,4;UBERON:0003104,1.30e-07,160;UBERON:0009142,1.30e-07,160;UBERON:0001155,1.74e-07,9;UBERON:0009569,3.65e-07,112;UBERON:0002530,7.14e-07,59;UBERON:0002113,8.31e-07,26;UBERON:0003918,8.31e-07,26;UBERON:0011143,8.31e-07,26;UBERON:0005095,8.31e-07,26;UBERON:0007687,8.31e-07,26 | |||
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| ||
|short_description=p5@ARHGEF10L | |||
}} | }} |
Latest revision as of 22:07, 18 September 2015
Short description: | p5@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARHGEF10L_5end |
Coexpression cluster: | C3909_Hepatocyte_gastrointestinal_signet_liver_argyrophil_pancreas_gastric |
Association with transcript: | -53bp_to_ENST00000375415, NM_001011722, uc001bao.2, uc001bap.2_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | Q9HCE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.01e-22 | 12 |
endodermal cell | 2.10e-08 | 58 |