FFCP PHASE1:Hg19::chr12:3862347..3862371,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84766 | |EntrezGene=84766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28657 | |HGNC=28657 | ||
|TSSclassifier=strong | |||
|UniProt=D7UEQ6,Q9BSW2 | |UniProt=D7UEQ6,Q9BSW2 | ||
|association_with_transcript=0bp_to_ENST00000444507,ENST00000535507,NM_001144958,NM_032680,uc001qmj.2,uc010sen.1,uc010seo.1_5end | |association_with_transcript=0bp_to_ENST00000444507,ENST00000535507,NM_001144958,NM_032680,uc001qmj.2,uc010sen.1,uc010seo.1_5end | ||
|cluster_id=chr12:3862347..3862371,- | |||
|description=CAGE_peak_2_at_EFCAB4B_5end | |description=CAGE_peak_2_at_EFCAB4B_5end | ||
|id=chr12:3862347..3862371,- | |id=chr12:3862347..3862371,- | ||
|ontology_enrichment_celltype=CL:0000542!9.19e-18!53;CL:0000051!9.19e-18!53;CL:0000838!1.42e-17!52;CL:0000037!3.95e-17!172;CL:0000566!3.95e-17!172;CL:0002032!1.01e-16!165;CL:0000837!1.01e-16!165;CL:0000988!4.33e-16!182;CL:0002087!1.38e-12!119;CL:0000738!9.28e-12!140;CL:0002031!1.00e-10!124;CL:0000084!1.29e-09!25;CL:0000827!1.29e-09!25;CL:0000134!2.50e-08!358;CL:0000791!3.21e-08!18;CL:0000789!3.21e-08!18;CL:0002420!3.21e-08!18;CL:0002419!3.21e-08!18;CL:0000790!3.21e-08!18;CL:0000945!5.10e-08!24;CL:0000826!5.10e-08!24;CL:0002320!1.36e-07!365 | |ontology_enrichment_celltype=CL:0000542!9.19e-18!53;CL:0000051!9.19e-18!53;CL:0000838!1.42e-17!52;CL:0000037!3.95e-17!172;CL:0000566!3.95e-17!172;CL:0002032!1.01e-16!165;CL:0000837!1.01e-16!165;CL:0000988!4.33e-16!182;CL:0002087!1.38e-12!119;CL:0000738!9.28e-12!140;CL:0002031!1.00e-10!124;CL:0000084!1.29e-09!25;CL:0000827!1.29e-09!25;CL:0000134!2.50e-08!358;CL:0000791!3.21e-08!18;CL:0000789!3.21e-08!18;CL:0002420!3.21e-08!18;CL:0002419!3.21e-08!18;CL:0000790!3.21e-08!18;CL:0000945!5.10e-08!24;CL:0000826!5.10e-08!24;CL:0002320!1.36e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.46e-13;25!CL:0000791;2.83e-12;18!CL:0000789;2.83e-12;18!CL:0002419;2.83e-12;18!CL:0000542;1.00e-11;53!CL:0000945;2.09e-07;24!CL:0000624;2.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.46e-22,52;CL:0000542,1.09e-21,53;CL:0000051,1.09e-21,53;CL:0000037,2.17e-15,168;CL:0002032,1.79e-14,161;CL:0000837,1.79e-14,161;CL:0000084,6.93e-14,25;CL:0000827,6.93e-14,25;CL:0000988,1.14e-13,177;CL:0000791,7.22e-13,18;CL:0000789,7.22e-13,18;CL:0002420,7.22e-13,18;CL:0002419,7.22e-13,18;CL:0000790,7.22e-13,18;CL:0000738,5.70e-10,136;CL:0002087,6.57e-09,115;CL:0000945,8.01e-08,24;CL:0000826,8.01e-08,24;CL:0002031,1.94e-07,120;CL:0000624,2.05e-07,6;CL:0000625,9.95e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.83e-12;18!CL:0000051;1.00e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!4.82e-12!51;DOID:0060083!4.82e-12!51;DOID:1240!7.41e-08!39 | |ontology_enrichment_disease=DOID:2531!4.82e-12!51;DOID:0060083!4.82e-12!51;DOID:1240!7.41e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.61e-07;51!DOID:0060083;2.61e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.96e-10,51;DOID:0060083,1.96e-10,51;DOID:0050686,8.24e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.89e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!3.89e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.410623275218653,0.125542639594803,1.14620108621927,1.23150884174919,0.944529375764151,1.18009283054671,0,1.23852898652861,0,0.30120591877825,0.369754010166788,0.542270404062111,2.70121541726101,0,1.10799081706375,1.40381113229099,2.38711957787437,0.671746422719773,0.32389366601898,0.257575567634187,0.436194716338694,0,0.242584061187816,0.232429036905685,0.411167888021826,0.929119112685311,0,0.768482119587302,0,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0.199463657621632,0,0.870627715885752,0.56738522469114,0.622822248995575,1.7587406567972,0,0.434377689410233,0,0.368277635987565,0,0.633765858935825,0,0.628975936525128,0.898629049171961,0.300353785683013,0.64290234678832,0.855038231223746,0.39783335439818,0.547992461293902,0,2.73069305631066,1.77901850772711,1.70692089026603,0.800791974072025,2.29900975981793,1.32208974556972,3.81621501814146,0,1.76171156811282,1.91136614062614,1.32171328579026,0,0.526768169550154,2.55722701147983,1.57204305099666,1.23360899399706,2.17342444007882,1.62961133316795,0.946895611469467,1.94826728407911,1.78256731016278,1.17842362989935,0.886135578334485,1.35401931882508,3.0741916734162,2.60118695119756,3.12432018746985,1.65810010671509,3.76744011455568,1.03800594213442,1.07016331235885,1.04535523804977,2.15287751125376,3.44898444241729,2.06176467289578,1.77113784413652,1.91139248594458,1.95325036156926,0,1.80690142893327,1.79181255616186,1.24930726552346,2.36777252044017,3.28451198768419,0.80642697289893,1.33720097891754,0.579297615531196,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0.175669571386252,0.458426764241994,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.476981248610684,0,0.371457501329565,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0.366403487860815,3.9534125230819,11.6334079244498,0.436094052142534,1.49091585508596,0.12663051166458,0.132409180813219,0.286836620748814,0.709336764396714,0,1.06748995729705,0,0,0.404132016209064,0.326923806226917,0.454072282934794,0.576175924479999,0,0.624320153660641,0.570471821544449,0.448346041655403,1.29177948508141,0.809364721840658,0.842704840213491,1.22492502752936,0.368502951935304,0.619954687054593,3.56400857184616,0.741800787835671,1.82032272387605,0,0.168336113954066,0.375355559615893,1.10825646193673,0.438977620880838,0.30648779579902,0.901428353439581,0.113432183160021,0.179389635688862,0.213557388818567,0.635795703478686,1.80054657650641,0.412210116953756,1.28820270022815,1.11670113798954,0.168776332241266,0.0974370051611986,1.26216887122057,0.184099797284599,0,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,2.6487785964879,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0,1.58040879591855,0.858486162094873,0,0.468008530278475,0.297262324577456,0,0,0.141775097242386,0,0,0,0,1.32072651019839,0.207328115540772,0.864719720501769,0.37872730027914,0,0,0,0,0,0.300343057843917,0,1.00917975910825,0,0.36669142910475,0,0,0.845302752556,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0,0,0,1.30294473717494,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,1.42636905040718,1.01346914667305,0.61642896765115,0.895304816199478,1.12085143993527,1.18218456121156,1.07813787429759,2.82354679815446,0,0,0,0,0,0,0,3.72973962092432,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.630809660135739,0.702848489956279,0,0,0,0,0,0.0868836144680828,0,0.686286847621712,2.27444828735176,0.215714200818617,1.38745825144478,0,0,0,0.744323423456331,0.460385919864187,0.561320188866147,0.512556597022804,0,0.64341568457443,0,0.616838775210622,0.710246901252508,0.574890092096664,1.03850885836724,0.464841513839837,0.241718899183244,0.601519410909855,0.184161977871793,0.574072240823034,0.910455840033585,0.524497659837696,0.902399225814824,0.462092022626489,0.784349769176855,1.46139224653261,0.211103257785751,0,0.510281115829547,0.647747748306418,0,0.812839312631559,0,0.509752546090077,0,1.11937377361089,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0.616194468458578,0.614014698904518,0.551346289938122,0.537101224341368,0.870100163485371,0.511359764496605,0.267096106940212,0,0.192190067365106,1.40373983744043,0.2023155617111,0.464845549297286,0.62962469366128,0,0,0.532306030317022,0,0,0,0,0.316379424718726,1.33441135746677,0.255897791311334,0,0,0,0.359744915166629,0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| ||
|short_description=p2@EFCAB4B | |short_description=p2@EFCAB4B | ||
}} | }} |
Latest revision as of 05:58, 18 September 2015
Short description: | p2@EFCAB4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFCAB4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000444507, ENST00000535507, NM_001144958, NM_032680, uc001qmj.2, uc010sen.1, uc010seo.1_5end |
EntrezGene: | EFCAB4B |
HGNC: | 28657 |
UniProt: | D7UEQ6Q9BSW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.46e-22 | 52 |
lymphocyte | 1.09e-21 | 53 |
common lymphoid progenitor | 1.09e-21 | 53 |
hematopoietic stem cell | 2.17e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.79e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-14 | 161 |
T cell | 6.93e-14 | 25 |
pro-T cell | 6.93e-14 | 25 |
hematopoietic cell | 1.14e-13 | 177 |
mature alpha-beta T cell | 7.22e-13 | 18 |
alpha-beta T cell | 7.22e-13 | 18 |
immature T cell | 7.22e-13 | 18 |
mature T cell | 7.22e-13 | 18 |
immature alpha-beta T cell | 7.22e-13 | 18 |
leukocyte | 5.70e-10 | 136 |
nongranular leukocyte | 6.57e-09 | 115 |
lymphocyte of B lineage | 8.01e-08 | 24 |
pro-B cell | 8.01e-08 | 24 |
hematopoietic lineage restricted progenitor cell | 1.94e-07 | 120 |
CD4-positive, alpha-beta T cell | 2.05e-07 | 6 |
CD8-positive, alpha-beta T cell | 9.95e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.96e-10 | 51 |
immune system cancer | 1.96e-10 | 51 |
organ system cancer | 8.24e-09 | 137 |