FFCP PHASE1:Hg19::chr1:183201317..183201324,+: Difference between revisions
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|id=chr1:183201317..183201324,+
|short_description=p@chr1:183201317..183201324,+
|description=CAGE_peak_at_chr1:183201317..183201324,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:183201317..183201324,+ | |||
|description=CAGE_peak_at_chr1:183201317..183201324,+ | |||
|id=chr1:183201317..183201324,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.24e-29!43;CL:0000066!1.14e-20!254;CL:0000223!1.88e-20!59;CL:0002621!2.43e-19!3;CL:0002368!4.84e-17!13;CL:0002536!1.33e-13!2;CL:0002159!1.41e-11!13;CL:0002251!5.67e-10!21;CL:0000240!1.49e-09!6;CL:0000311!1.49e-09!6;CL:0000079!1.49e-09!6;CL:0000237!1.49e-09!6;CL:0000036!1.49e-09!6;CL:0000357!1.49e-09!6;CL:0000114!1.49e-09!6;CL:0000068!2.43e-09!3;CL:0000069!2.43e-09!3;CL:0000307!2.43e-09!3;CL:0000377!2.43e-09!3;CL:0002166!4.88e-09!3;CL:0002231!5.29e-09!3;CL:0000362!1.93e-07!8;CL:0000244!2.28e-07!4;CL:0000731!2.28e-07!4;CL:0002336!3.40e-07!1;CL:0002261!3.40e-07!1;CL:0002170!3.40e-07!1;CL:0002327!4.92e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.39e-28;13!CL:0000307;1.60e-14;3!CL:0002621;1.60e-14;3!CL:0002076;6.13e-12;42!CL:0000244;3.10e-11;4!CL:0000731;3.10e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.33e-28,13;CL:0002076,9.03e-16,42;CL:0000068,1.60e-14,3;CL:0000069,1.60e-14,3;CL:0000307,1.60e-14,3;CL:0000377,1.60e-14,3;CL:0002621,2.09e-14,3;CL:0000223,1.28e-11,58;CL:0000244,3.42e-11,4;CL:0000731,3.42e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.60e-14;3!CL:0000223;6.92e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.43e-19!3;UBERON:0004119!5.70e-08!169;UBERON:0000925!5.70e-08!169;UBERON:0006595!5.70e-08!169;UBERON:0001828!1.48e-07!8;UBERON:0000997!4.34e-07!1;UBERON:0005056!4.34e-07!1;UBERON:0001911!4.92e-07!4;UBERON:0005333!4.92e-07!4;UBERON:0008425!4.92e-07!4;UBERON:0005311!4.92e-07!4;UBERON:0001708!5.55e-07!4;UBERON:0001704!5.55e-07!4;UBERON:0001004!6.48e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.60e-14;3!UBERON:0000486;3.14e-14;12!UBERON:0000365;2.97e-09;5!UBERON:0005910;6.33e-08;6!UBERON:0003126;5.70e-07;7!UBERON:0003929;5.70e-07;7!UBERON:0001005;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.09e-14,3;UBERON:0001004,3.00e-09,74;UBERON:0000365,3.22e-09,5;UBERON:0005910,6.78e-08,6;UBERON:0000065,1.99e-07,54;UBERON:0003126,5.70e-07,7;UBERON:0001005,5.70e-07,7;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr1:183201317..183201324,+ | |||
}} | }} |
Latest revision as of 01:09, 28 July 2015
Short description: | p@chr1:183201317..183201324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183201317..183201324, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.33e-28 | 13 |
endo-epithelial cell | 9.03e-16 | 42 |
duct epithelial cell | 1.60e-14 | 3 |
branched duct epithelial cell | 1.60e-14 | 3 |
tracheal epithelial cell | 1.60e-14 | 3 |
tracheoblast | 1.60e-14 | 3 |
gingival epithelial cell | 2.09e-14 | 3 |
endodermal cell | 1.28e-11 | 58 |
transitional epithelial cell | 3.42e-11 | 4 |
urothelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.09e-14 | 3 |
respiratory system | 3.00e-09 | 74 |
urothelium | 3.22e-09 | 5 |
transitional epithelium | 6.78e-08 | 6 |
respiratory tract | 1.99e-07 | 54 |
trachea | 5.70e-07 | 7 |
respiratory airway | 5.70e-07 | 7 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |