FFCP PHASE1:Hg19::chr3:154861314..154861325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:154861314..154861325,+ | |||
|description=CAGE_peak_at_chr3:154861314..154861325,+ | |description=CAGE_peak_at_chr3:154861314..154861325,+ | ||
|id=chr3:154861314..154861325,+ | |id=chr3:154861314..154861325,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.33e-13!180;CL:0002620!2.78e-08!23;CL:0000057!1.97e-07!75;CL:0000188!2.64e-07!9;CL:0000680!3.98e-07!57;CL:0000056!3.98e-07!57;CL:0000355!3.98e-07!57;CL:0000048!7.93e-07!430 | |ontology_enrichment_celltype=CL:0000055!8.33e-13!180;CL:0002620!2.78e-08!23;CL:0000057!1.97e-07!75;CL:0000188!2.64e-07!9;CL:0000680!3.98e-07!57;CL:0000056!3.98e-07!57;CL:0000355!3.98e-07!57;CL:0000048!7.93e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002561;5.74e-17;2!CL:0002521;2.32e-11;3!CL:0000775;2.32e-11;3!CL:0000136;5.59e-10;13!CL:0000785;5.97e-09;1!CL:0000819;5.97e-09;1!CL:0002559;2.62e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,6.75e-17,2;CL:0002521,2.38e-11,3;CL:0000775,2.51e-11,3;CL:0000819,3.31e-09,1;CL:0000136,1.17e-08,15;CL:0002559,2.79e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.60e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;5.97e-09;1!DOID:8675;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.31e-09,1;DOID:8675,3.31e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.66e-10!45;UBERON:0002416!1.66e-10!45;UBERON:0004290!1.54e-09!70;UBERON:0003102!3.59e-08!95;UBERON:0000914!5.90e-08!83;UBERON:0002329!5.90e-08!83;UBERON:0003077!5.90e-08!83;UBERON:0003059!5.90e-08!83;UBERON:0007282!5.90e-08!83;UBERON:0009618!5.90e-08!83;UBERON:0007285!5.90e-08!83;UBERON:0000486!2.05e-07!82;UBERON:0002385!2.49e-07!63;UBERON:0001015!2.49e-07!63;UBERON:0000383!2.49e-07!63;UBERON:0002097!4.98e-07!40;UBERON:0001134!5.35e-07!61;UBERON:0002036!5.35e-07!61;UBERON:0003082!5.35e-07!61;UBERON:0002072!6.00e-07!5 | |ontology_enrichment_uberon=UBERON:0002199!1.66e-10!45;UBERON:0002416!1.66e-10!45;UBERON:0004290!1.54e-09!70;UBERON:0003102!3.59e-08!95;UBERON:0000914!5.90e-08!83;UBERON:0002329!5.90e-08!83;UBERON:0003077!5.90e-08!83;UBERON:0003059!5.90e-08!83;UBERON:0007282!5.90e-08!83;UBERON:0009618!5.90e-08!83;UBERON:0007285!5.90e-08!83;UBERON:0000486!2.05e-07!82;UBERON:0002385!2.49e-07!63;UBERON:0001015!2.49e-07!63;UBERON:0000383!2.49e-07!63;UBERON:0002097!4.98e-07!40;UBERON:0001134!5.35e-07!61;UBERON:0002036!5.35e-07!61;UBERON:0003082!5.35e-07!61;UBERON:0002072!6.00e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;5.74e-17;2!UBERON:0005942;5.74e-17;2!UBERON:0005932;5.74e-17;2!UBERON:0002190;2.32e-11;3!UBERON:0002331;1.50e-07;10!UBERON:0002073;2.62e-07;5!UBERON:0002072;3.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,6.75e-17,2;UBERON:0005942,6.75e-17,2;UBERON:0005932,6.75e-17,2;UBERON:0002190,2.38e-11,3;UBERON:0002331,1.17e-07,10;UBERON:0000358,1.17e-07,10;UBERON:0000307,1.17e-07,10;UBERON:0000091,1.17e-07,10;UBERON:0000087,1.17e-07,10;UBERON:0007010,1.17e-07,10;UBERON:0007806,1.17e-07,10;UBERON:0008780,1.17e-07,10;UBERON:0005728,1.17e-07,10;UBERON:0002073,2.79e-07,5;UBERON:0005086,2.79e-07,5;UBERON:0002072,3.80e-07,5 | |||
|phase1_expression=0.363356758541113,3.63970890614671,0,3.00219895059391,0,0,2.53299878168311,0.631719873426831,1.30592814099919,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,1.34503812496621,0.117434498643765,0.323745888736263,0.421352420106746,0.408308342509787,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0.427114777637135,1.05965950579781,0,0,0.515281080091258,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0.901029173531752,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,1.62786481617433,0.823240336780769,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,1.30139853857622,0,0,0,2.99602809578873,0,1.24324654030811,0,0,0.271265023699736,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0,0.955719759148911,0,0,0,0,0,0,0,0,0.744323423456331,0,1.40330047216537,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.551346289938122,0.859361958946189,0.580066775656914,0.596586391912706,0.0890320356467374,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0.359744915166629,1.64722217841633,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.573645408816206,1.3754865741837,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.534120355637366,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0.23056390438806,0,0,0.638002319463839,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,1.64209310294099,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0.701139929541673,0,0.568209015825267,0,0,0,0.151230923763239,0,0,0.318593534327405,1.34940933649081,0,0.414706207840855,0.797525143673985,1.5652351854352,0.300515217994437,0,0.406870733204662,0.545545977607678,0,0,0.796191777397232,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0.734210113519403,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0.352675943690684,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946656005844523,0.426067023795788,0,0.22910686854405,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0,0.301925687133347,0.617393264863557,0.874238242015829,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,2.23197010900051,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0.829169439458779,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0.665320713092027,0,0.106727345877715,0,0,4.69281884806909,0,0,0,0,0 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| ||
|short_description=p@chr3:154861314..154861325,+ | |short_description=p@chr3:154861314..154861325,+ | ||
}} | }} |
Latest revision as of 17:21, 29 July 2015
Short description: | p@chr3:154861314..154861325, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:154861314..154861325, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 6.75e-17 | 2 |
subcutaneous fat cell | 2.38e-11 | 3 |
neutrophil | 2.51e-11 | 3 |
B-1 B cell | 3.31e-09 | 1 |
fat cell | 1.17e-08 | 15 |
hair follicle cell | 2.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 6.75e-17 | 2 |
hair outer root sheath | 6.75e-17 | 2 |
bulb of hair follicle | 6.75e-17 | 2 |
subcutaneous adipose tissue | 2.38e-11 | 3 |
umbilical cord | 1.17e-07 | 10 |
blastocyst | 1.17e-07 | 10 |
blastula | 1.17e-07 | 10 |
bilaminar disc | 1.17e-07 | 10 |
inner cell mass | 1.17e-07 | 10 |
cleaving embryo | 1.17e-07 | 10 |
connecting stalk | 1.17e-07 | 10 |
inner cell mass derived epiblast | 1.17e-07 | 10 |
extraembryonic mesoderm | 1.17e-07 | 10 |
hair follicle | 2.79e-07 | 5 |
hair follicle placode | 2.79e-07 | 5 |
hypodermis | 3.80e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.31e-09 | 1 |
lymphosarcoma | 3.31e-09 | 1 |