FFCP PHASE1:Hg19::chr18:56247489..56247502,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_AK125243_5end | |association_with_transcript=-88bp_to_AK125243_5end | ||
|cluster_id=chr18:56247489..56247502,- | |||
|coexpression_cluster_id=C2468 | |coexpression_cluster_id=C2468 | ||
|description=CAGE_peak_28_at_ALPK2_5end | |description=CAGE_peak_28_at_ALPK2_5end | ||
|id=chr18:56247489..56247502,- | |id=chr18:56247489..56247502,- | ||
|ontology_enrichment_celltype=CL:0000128!4.28e-12!7;CL:0000126!4.28e-12!7;CL:0000127!4.28e-12!7;CL:0002453!4.28e-12!7;CL:0002620!1.15e-10!23;CL:0000243!7.33e-10!15;CL:0000125!7.33e-10!15;CL:0000030!7.33e-10!15;CL:0000339!7.33e-10!15;CL:0000095!1.30e-08!17;CL:0000123!1.30e-08!17;CL:0002605!2.41e-08!3;CL:0000133!2.91e-07!59 | |ontology_enrichment_celltype=CL:0000128!4.28e-12!7;CL:0000126!4.28e-12!7;CL:0000127!4.28e-12!7;CL:0002453!4.28e-12!7;CL:0002620!1.15e-10!23;CL:0000243!7.33e-10!15;CL:0000125!7.33e-10!15;CL:0000030!7.33e-10!15;CL:0000339!7.33e-10!15;CL:0000095!1.30e-08!17;CL:0000123!1.30e-08!17;CL:0002605!2.41e-08!3;CL:0000133!2.91e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.74e-28;5!CL:0002605;1.96e-21;3!CL:0000228;2.25e-16;1!CL:0002372;2.25e-16;1!CL:0000990;3.79e-16;8!CL:0000451;2.50e-13;10!CL:0000128;9.52e-10;7!CL:0000126;9.52e-10;7!CL:0000127;9.52e-10;7!CL:0002097;5.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.44e-28,5;CL:0002605,2.41e-21,3;CL:0000228,1.93e-16,1;CL:0002372,1.93e-16,1;CL:0000990,3.42e-16,8;CL:0000451,2.30e-13,10;CL:0000128,1.04e-09,7;CL:0000126,1.04e-09,7;CL:0000127,1.04e-09,7;CL:0002453,1.04e-09,7;CL:0002097,4.70e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;3.43e-09;2!DOID:3910;5.08e-09;2!DOID:114;7.49e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.43e-09,2;DOID:3910,5.49e-09,2;DOID:114,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.62e-07!40 | |ontology_enrichment_uberon=UBERON:0002097!2.62e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.08e-09;2!UBERON:0002173;5.08e-09;2!UBERON:0002186;5.08e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.49e-09,2;UBERON:0002173,5.49e-09,2;UBERON:0002186,5.49e-09,2 | |||
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| ||
|short_description=p28@ALPK2 | |short_description=p28@ALPK2 | ||
}} | }} |
Latest revision as of 00:12, 20 September 2015
Short description: | p28@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_ALPK2_5end |
Coexpression cluster: | C2468_clear_migratory_mesothelioma_Astrocyte_glioblastoma_alveolar_renal |
Association with transcript: | -88bp_to_AK125243_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.44e-28 | 5 |
astrocyte of the cerebral cortex | 2.41e-21 | 3 |
multinucleate cell | 1.93e-16 | 1 |
myotube | 1.93e-16 | 1 |
conventional dendritic cell | 3.42e-16 | 8 |
dendritic cell | 2.30e-13 | 10 |
oligodendrocyte | 1.04e-09 | 7 |
macroglial cell | 1.04e-09 | 7 |
astrocyte | 1.04e-09 | 7 |
oligodendrocyte precursor cell | 1.04e-09 | 7 |
cortical cell of adrenal gland | 4.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.49e-09 | 2 |
alveolar duct | 5.49e-09 | 2 |
bronchiole | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.43e-09 | 2 |
lung adenocarcinoma | 5.49e-09 | 2 |
heart disease | 8.09e-09 | 2 |