FFCP PHASE1:Hg19::chr17:3593016..3593043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:3593016..3593043,- | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr17:3593016..3593043,- | |description=CAGE_peak_at_chr17:3593016..3593043,- | ||
|id=chr17:3593016..3593043,- | |id=chr17:3593016..3593043,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003112!4.66e-66!1;UBERON:0000032!4.66e-66!1;UBERON:0005253!4.66e-66!1;UBERON:0003128!4.66e-66!1;UBERON:0002241!4.66e-66!1;UBERON:0001703!4.66e-66!1;UBERON:0004761!4.66e-66!1;UBERON:0009617!4.66e-66!1;UBERON:0002370!7.35e-18!4;UBERON:0005058!7.35e-18!4;UBERON:0009113!7.35e-18!4;UBERON:0003295!7.35e-18!4;UBERON:0005562!7.35e-18!4;UBERON:0003351!2.19e-12!6;UBERON:0004177!8.16e-11!7;UBERON:0000974!5.73e-08!10;UBERON:0003408!5.73e-08!10;UBERON:0001042!5.73e-08!10;UBERON:0009145!5.73e-08!10;UBERON:0006562!2.32e-07!11;UBERON:0009722!2.32e-07!11;UBERON:0007690!2.32e-07!11;UBERON:0003129!2.63e-07!11 | |ontology_enrichment_uberon=UBERON:0003112!4.66e-66!1;UBERON:0000032!4.66e-66!1;UBERON:0005253!4.66e-66!1;UBERON:0003128!4.66e-66!1;UBERON:0002241!4.66e-66!1;UBERON:0001703!4.66e-66!1;UBERON:0004761!4.66e-66!1;UBERON:0009617!4.66e-66!1;UBERON:0002370!7.35e-18!4;UBERON:0005058!7.35e-18!4;UBERON:0009113!7.35e-18!4;UBERON:0003295!7.35e-18!4;UBERON:0005562!7.35e-18!4;UBERON:0003351!2.19e-12!6;UBERON:0004177!8.16e-11!7;UBERON:0000974!5.73e-08!10;UBERON:0003408!5.73e-08!10;UBERON:0001042!5.73e-08!10;UBERON:0009145!5.73e-08!10;UBERON:0006562!2.32e-07!11;UBERON:0009722!2.32e-07!11;UBERON:0007690!2.32e-07!11;UBERON:0003129!2.63e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.55e-98;2!UBERON:0005058;1.55e-98;2!UBERON:0009113;1.55e-98;2!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002390;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.10e-50,4;UBERON:0005058,3.10e-50,4;UBERON:0009113,3.10e-50,4;UBERON:0003295,3.10e-50,4;UBERON:0005562,3.10e-50,4;UBERON:0003351,4.27e-34,6;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000974,3.81e-21,10;UBERON:0003408,3.81e-21,10;UBERON:0001042,3.81e-21,10;UBERON:0009145,3.81e-21,10;UBERON:0006562,2.25e-19,11;UBERON:0009722,2.25e-19,11;UBERON:0007690,2.25e-19,11;UBERON:0008814,1.85e-12,18;UBERON:0001557,6.95e-12,19;UBERON:0004807,1.52e-08,28;UBERON:0000077,2.67e-08,29;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p@chr17:3593016..3593043,- | |short_description=p@chr17:3593016..3593043,- | ||
}} | }} |
Latest revision as of 15:51, 25 July 2015
Short description: | p@chr17:3593016..3593043, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:3593016..3593043, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.10e-50 | 4 |
hemolymphoid system gland | 3.10e-50 | 4 |
thymic region | 3.10e-50 | 4 |
pharyngeal gland | 3.10e-50 | 4 |
thymus primordium | 3.10e-50 | 4 |
pharyngeal epithelium | 4.27e-34 | 6 |
hemopoietic organ | 1.78e-29 | 7 |
immune organ | 1.78e-29 | 7 |
neck | 3.81e-21 | 10 |
gland of gut | 3.81e-21 | 10 |
chordate pharynx | 3.81e-21 | 10 |
pharyngeal region of foregut | 3.81e-21 | 10 |
pharynx | 2.25e-19 | 11 |
entire pharyngeal arch endoderm | 2.25e-19 | 11 |
early pharyngeal endoderm | 2.25e-19 | 11 |
pharyngeal arch system | 1.85e-12 | 18 |
upper respiratory tract | 6.95e-12 | 19 |
respiratory system epithelium | 1.52e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
endocrine gland | 4.03e-07 | 35 |