FFCP PHASE1:Hg19::chr1:207103182..207103214,-: Difference between revisions
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|id=chr1:207103182..207103214,-
|short_description=p3@AK026320
|description=CAGE_peak_3_at_AK026320_5end
|association_with_transcript=-314bp_to_AK026320_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-314bp_to_AK026320_5end | |||
|cluster_id=chr1:207103182..207103214,- | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_3_at_AK026320_5end | |||
|id=chr1:207103182..207103214,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.63e-12;1!UBERON:0008801;3.10e-12;1!UBERON:0001045;5.93e-12;1!UBERON:0006242;5.93e-12;1!UBERON:0006595;1.70e-08;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!1.09e-16!129;UBERON:0004185!1.09e-16!129;UBERON:0007023!4.20e-16!115;UBERON:0001007!2.06e-14!155;UBERON:0001555!2.06e-14!155;UBERON:0007026!2.06e-14!155;UBERON:0004119!9.14e-13!169;UBERON:0000925!9.14e-13!169;UBERON:0006595!9.14e-13!169;UBERON:0001829!9.25e-12!2;UBERON:0003127!3.70e-11!2;UBERON:0000077!1.11e-10!130;UBERON:0000078!1.26e-09!18;UBERON:0001041!2.01e-09!98;UBERON:0001044!1.51e-08!6;UBERON:0003293!1.51e-08!6;UBERON:0003294!1.51e-08!6;UBERON:0010047!1.51e-08!6;UBERON:0000167!1.51e-08!6;UBERON:0000166!3.69e-08!21;UBERON:0000161!7.59e-08!35;UBERON:0001723!1.87e-07!3;UBERON:0001033!1.87e-07!3;UBERON:0010056!1.87e-07!3;UBERON:0006562!2.50e-07!11;UBERON:0001736!9.91e-07!1;UBERON:0006298!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;9.18e-23;2!UBERON:0004921;6.46e-20;33!UBERON:0001044;7.51e-17;6!UBERON:0003293;7.51e-17;6!UBERON:0003294;7.51e-17;6!UBERON:0010047;7.51e-17;6!UBERON:0003408;7.51e-17;6!UBERON:0000167;7.51e-17;6!UBERON:0000160;9.63e-15;17!UBERON:0001736;2.63e-12;1!UBERON:0001831;3.10e-12;1!UBERON:0001567;3.10e-12;1!UBERON:0001154;5.93e-12;1!UBERON:0001153;5.93e-12;1!UBERON:0009854;5.93e-12;1!UBERON:0002171;8.64e-12;1!UBERON:0006518;8.64e-12;1!UBERON:0008949;8.64e-12;1!UBERON:0000101;8.64e-12;1!UBERON:0002167;8.64e-12;1!UBERON:0005409;1.61e-11;22!UBERON:0001155;2.74e-11;9!UBERON:0001555;9.52e-10;54!UBERON:0002108;1.80e-09;4!UBERON:0000059;2.48e-09;11!UBERON:0001007;1.93e-08;81!UBERON:0002365;1.95e-08;31!UBERON:0002330;1.95e-08;31!UBERON:0001041;1.60e-07;14!UBERON:0004089;9.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.70e-23,2;UBERON:0001044,8.14e-17,6;UBERON:0003293,8.14e-17,6;UBERON:0003294,8.14e-17,6;UBERON:0010047,8.14e-17,6;UBERON:0000167,8.14e-17,6;UBERON:0004921,2.51e-15,118;UBERON:0000160,9.09e-15,17;UBERON:0001007,4.32e-14,145;UBERON:0001555,4.32e-14,145;UBERON:0007026,4.32e-14,145;UBERON:0007023,8.25e-14,114;UBERON:0004119,1.43e-12,160;UBERON:0000925,1.43e-12,160;UBERON:0006595,1.43e-12,160;UBERON:0001736,2.63e-12,1;UBERON:0006298,2.63e-12,1;UBERON:0001831,3.27e-12,1;UBERON:0001567,3.27e-12,1;UBERON:0008801,3.27e-12,1;UBERON:0001154,6.26e-12,1;UBERON:0001153,6.26e-12,1;UBERON:0001045,6.26e-12,1;UBERON:0002171,8.64e-12,1;UBERON:0006518,8.64e-12,1;UBERON:0008949,8.64e-12,1;UBERON:0000101,8.64e-12,1;UBERON:0002167,8.64e-12,1;UBERON:0001155,2.69e-11,9;UBERON:0003408,2.57e-10,10;UBERON:0005409,3.41e-10,25;UBERON:0002108,1.69e-09,4;UBERON:0000059,2.45e-09,11;UBERON:0002365,1.98e-08,31;UBERON:0002330,1.98e-08,31;UBERON:0011216,3.24e-08,223;UBERON:0001041,8.17e-07,87;UBERON:0004089,9.96e-07,2 | |||
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|short_description=p3@AK026320 | |||
}} | }} |
Latest revision as of 03:01, 28 July 2015
Short description: | p3@AK026320 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK026320_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | -314bp_to_AK026320_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 9.70e-23 | 2 |
saliva-secreting gland | 8.14e-17 | 6 |
gland of oral region | 8.14e-17 | 6 |
gland of foregut | 8.14e-17 | 6 |
oral gland | 8.14e-17 | 6 |
oral cavity | 8.14e-17 | 6 |
subdivision of digestive tract | 2.51e-15 | 118 |
intestine | 9.09e-15 | 17 |
digestive system | 4.32e-14 | 145 |
digestive tract | 4.32e-14 | 145 |
primitive gut | 4.32e-14 | 145 |
adult organism | 8.25e-14 | 114 |
endoderm-derived structure | 1.43e-12 | 160 |
endoderm | 1.43e-12 | 160 |
presumptive endoderm | 1.43e-12 | 160 |
submandibular gland | 2.63e-12 | 1 |
submandibular gland primordium | 2.63e-12 | 1 |
parotid gland | 3.27e-12 | 1 |
cheek | 3.27e-12 | 1 |
parotid gland primordium | 3.27e-12 | 1 |
vermiform appendix | 6.26e-12 | 1 |
caecum | 6.26e-12 | 1 |
midgut | 6.26e-12 | 1 |
lower lobe of right lung | 8.64e-12 | 1 |
right lung lobe | 8.64e-12 | 1 |
lower lobe of lung | 8.64e-12 | 1 |
lobe of lung | 8.64e-12 | 1 |
right lung | 8.64e-12 | 1 |
colon | 2.69e-11 | 9 |
gland of gut | 2.57e-10 | 10 |
gastrointestinal system | 3.41e-10 | 25 |
small intestine | 1.69e-09 | 4 |
large intestine | 2.45e-09 | 11 |
exocrine gland | 1.98e-08 | 31 |
exocrine system | 1.98e-08 | 31 |
organ system subdivision | 3.24e-08 | 223 |
foregut | 8.17e-07 | 87 |
midface | 9.96e-07 | 2 |