FFCP PHASE1:Hg19::chr1:207119738..207119839,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:207119738..207119839,-
|short_description=p1@PIGR
|description=CAGE_peak_1_at_PIGR_5end
|association_with_transcript=0bp_to_ENST00000356495,NM_002644,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5284 | |EntrezGene=5284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8968 | |HGNC=8968 | ||
|TSSclassifier=strong | |||
|UniProt=P01833 | |UniProt=P01833 | ||
|association_with_transcript=0bp_to_ENST00000356495,NM_002644,uc001hez.2,uc009xbz.2_5end | |||
|cluster_id=chr1:207119738..207119839,- | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_1_at_PIGR_5end | |||
|id=chr1:207119738..207119839,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.15e-08;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-27!115;UBERON:0004119!1.21e-17!169;UBERON:0000925!1.21e-17!169;UBERON:0006595!1.21e-17!169;UBERON:0004921!5.37e-16!129;UBERON:0004185!5.37e-16!129;UBERON:0001007!1.56e-13!155;UBERON:0001555!1.56e-13!155;UBERON:0007026!1.56e-13!155;UBERON:0000077!2.69e-10!130;UBERON:0001041!2.70e-09!98;UBERON:0005409!1.02e-08!35;UBERON:0006562!5.14e-07!11;UBERON:0000160!5.91e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.56e-20;33!UBERON:0005409;5.32e-15;22!UBERON:0000160;4.97e-14;17!UBERON:0002108;1.97e-09;4!UBERON:0001555;1.95e-08;54!UBERON:0001007;3.74e-08;81!UBERON:0001829;2.05e-07;2!UBERON:0003127;3.71e-07;2!UBERON:0006562;5.42e-07;2!UBERON:0001041;8.68e-07;14!UBERON:0000341;9.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.24e-22,114;UBERON:0004921,3.94e-21,118;UBERON:0004119,1.86e-18,160;UBERON:0000925,1.86e-18,160;UBERON:0006595,1.86e-18,160;UBERON:0001007,1.10e-16,145;UBERON:0001555,1.10e-16,145;UBERON:0007026,1.10e-16,145;UBERON:0000160,5.15e-14,17;UBERON:0005409,6.12e-13,25;UBERON:0011216,4.46e-10,223;UBERON:0001041,6.28e-10,87;UBERON:0002108,2.09e-09,4;UBERON:0001829,2.05e-07,2;UBERON:0003127,3.71e-07,2;UBERON:0000341,9.34e-07,2 | |||
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| ||
|short_description=p1@PIGR | |||
}} | }} |
Latest revision as of 06:51, 20 September 2015
Short description: | p1@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIGR_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | 0bp_to_ENST00000356495, NM_002644, uc001hez.2, uc009xbz.2_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | P01833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.24e-22 | 114 |
subdivision of digestive tract | 3.94e-21 | 118 |
endoderm-derived structure | 1.86e-18 | 160 |
endoderm | 1.86e-18 | 160 |
presumptive endoderm | 1.86e-18 | 160 |
digestive system | 1.10e-16 | 145 |
digestive tract | 1.10e-16 | 145 |
primitive gut | 1.10e-16 | 145 |
intestine | 5.15e-14 | 17 |
gastrointestinal system | 6.12e-13 | 25 |
organ system subdivision | 4.46e-10 | 223 |
foregut | 6.28e-10 | 87 |
small intestine | 2.09e-09 | 4 |
major salivary gland | 2.05e-07 | 2 |
open tracheal system trachea | 3.71e-07 | 2 |
throat | 9.34e-07 | 2 |