FFCP PHASE1:Hg19::chr3:16555018..16555038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23180 | |EntrezGene=23180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30278 | |HGNC=30278 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAR1 | |UniProt=F8WAR1 | ||
|association_with_transcript=0bp_to_ENST00000453536_5end | |association_with_transcript=0bp_to_ENST00000453536_5end | ||
|cluster_id=chr3:16555018..16555038,- | |||
|coexpression_cluster_id=C4303 | |coexpression_cluster_id=C4303 | ||
|description=CAGE_peak_3_at_RFTN1_5end | |description=CAGE_peak_3_at_RFTN1_5end | ||
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|ontology_enrichment_celltype=CL:0000048!2.93e-12!430;CL:0000723!5.90e-11!436;CL:0000738!5.81e-10!140;CL:0000034!7.10e-10!444;CL:0002320!8.14e-10!365;CL:0000134!2.03e-09!358;CL:0002031!5.66e-09!124;CL:0002087!1.89e-08!119;CL:0000219!5.36e-08!390;CL:0000136!6.10e-08!15;CL:0000451!5.32e-07!10;CL:0002057!7.04e-07!42 | |ontology_enrichment_celltype=CL:0000048!2.93e-12!430;CL:0000723!5.90e-11!436;CL:0000738!5.81e-10!140;CL:0000034!7.10e-10!444;CL:0002320!8.14e-10!365;CL:0000134!2.03e-09!358;CL:0002031!5.66e-09!124;CL:0002087!1.89e-08!119;CL:0000219!5.36e-08!390;CL:0000136!6.10e-08!15;CL:0000451!5.32e-07!10;CL:0002057!7.04e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.63e-08;13!CL:0000451;1.42e-07;10!CL:0000860;1.64e-07;33!CL:0002057;1.64e-07;33!CL:0000473;8.98e-07;39!CL:0000234;8.98e-07;39 | |ontology_enrichment_celltype_v019=CL:0000136;3.63e-08;13!CL:0000451;1.42e-07;10!CL:0000860;1.64e-07;33!CL:0002057;1.64e-07;33!CL:0000473;8.98e-07;39!CL:0000234;8.98e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,7.38e-11,427;CL:0000738,1.30e-10,136;CL:0000723,8.62e-10,433;CL:0002320,1.24e-09,361;CL:0000134,2.48e-09,354;CL:0000034,4.31e-09,441;CL:0002031,5.98e-09,120;CL:0000136,6.02e-09,15;CL:0002087,1.90e-08,115;CL:0000219,2.30e-08,386;CL:0000557,1.28e-07,67;CL:0000451,1.34e-07,10;CL:0002009,2.65e-07,61;CL:0000473,3.04e-07,48;CL:0000234,3.04e-07,48 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.99e-09!375;UBERON:0000479!1.36e-08!787;UBERON:0002204!1.41e-07!167;UBERON:0002390!7.76e-07!102;UBERON:0003061!7.76e-07!102 | |ontology_enrichment_uberon=UBERON:0002384!1.99e-09!375;UBERON:0000479!1.36e-08!787;UBERON:0002204!1.41e-07!167;UBERON:0002390!7.76e-07!102;UBERON:0003061!7.76e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000479,1.59e-09,773;UBERON:0002384,3.59e-09,371;UBERON:0002390,1.12e-07,98;UBERON:0003061,1.12e-07,98;UBERON:0002405,1.28e-07,93;UBERON:0002193,4.25e-07,108 | |||
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| ||
|short_description=p3@RFTN1 | |short_description=p3@RFTN1 | ||
}} | }} |
Latest revision as of 13:09, 16 September 2015
Short description: | p3@RFTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RFTN1_5end |
Coexpression cluster: | C4303_migratory_cord_Mast_immature_Adipocyte_mature_mycosis |
Association with transcript: | 0bp_to_ENST00000453536_5end |
EntrezGene: | RFTN1 |
HGNC: | 30278 |
UniProt: | F8WAR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 7.38e-11 | 427 |
leukocyte | 1.30e-10 | 136 |
somatic stem cell | 8.62e-10 | 433 |
connective tissue cell | 1.24e-09 | 361 |
mesenchymal cell | 2.48e-09 | 354 |
stem cell | 4.31e-09 | 441 |
hematopoietic lineage restricted progenitor cell | 5.98e-09 | 120 |
fat cell | 6.02e-09 | 15 |
nongranular leukocyte | 1.90e-08 | 115 |
motile cell | 2.30e-08 | 386 |
granulocyte monocyte progenitor cell | 1.28e-07 | 67 |
dendritic cell | 1.34e-07 | 10 |
macrophage dendritic cell progenitor | 2.65e-07 | 61 |
defensive cell | 3.04e-07 | 48 |
phagocyte | 3.04e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
tissue | 1.59e-09 | 773 |
connective tissue | 3.59e-09 | 371 |
hematopoietic system | 1.12e-07 | 98 |
blood island | 1.12e-07 | 98 |
immune system | 1.28e-07 | 93 |
hemolymphoid system | 4.25e-07 | 108 |