FFCP PHASE1:Hg19::chr5:150591651..150591662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJD0 | |UniProt=E5RJD0 | ||
|association_with_transcript=-48bp_to_ENST00000523466_5end | |association_with_transcript=-48bp_to_ENST00000523466_5end | ||
|cluster_id=chr5:150591651..150591662,+ | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_13_at_GM2A_5end | |description=CAGE_peak_13_at_GM2A_5end | ||
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|ontology_enrichment_celltype=CL:0000542!3.53e-35!53;CL:0000051!3.53e-35!53;CL:0000838!3.60e-33!52;CL:0000738!1.23e-32!140;CL:0000037!3.32e-29!172;CL:0000566!3.32e-29!172;CL:0000945!2.33e-28!24;CL:0000826!2.33e-28!24;CL:0000988!5.34e-27!182;CL:0002087!3.64e-26!119;CL:0002032!1.48e-24!165;CL:0000837!1.48e-24!165;CL:0002031!3.48e-23!124;CL:0000236!3.49e-11!14;CL:0000134!2.05e-10!358;CL:0002320!5.31e-10!365;CL:0000219!2.97e-09!390;CL:0000723!3.99e-07!436;CL:0000084!6.33e-07!25;CL:0000827!6.33e-07!25;CL:0000048!7.79e-07!430;CL:0000034!8.46e-07!444 | |ontology_enrichment_celltype=CL:0000542!3.53e-35!53;CL:0000051!3.53e-35!53;CL:0000838!3.60e-33!52;CL:0000738!1.23e-32!140;CL:0000037!3.32e-29!172;CL:0000566!3.32e-29!172;CL:0000945!2.33e-28!24;CL:0000826!2.33e-28!24;CL:0000988!5.34e-27!182;CL:0002087!3.64e-26!119;CL:0002032!1.48e-24!165;CL:0000837!1.48e-24!165;CL:0002031!3.48e-23!124;CL:0000236!3.49e-11!14;CL:0000134!2.05e-10!358;CL:0002320!5.31e-10!365;CL:0000219!2.97e-09!390;CL:0000723!3.99e-07!436;CL:0000084!6.33e-07!25;CL:0000827!6.33e-07!25;CL:0000048!7.79e-07!430;CL:0000034!8.46e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.96e-12;24!CL:0000771;2.27e-10;2!CL:0000542;1.82e-08;53!CL:0002567;3.06e-07;3 | |ontology_enrichment_celltype_v019=CL:0000945;2.96e-12;24!CL:0000771;2.27e-10;2!CL:0000542;1.82e-08;53!CL:0002567;3.06e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.78e-12,52;CL:0000945,3.09e-12,24;CL:0000826,3.09e-12,24;CL:0000542,4.76e-12,53;CL:0000051,4.76e-12,53;CL:0000771,2.07e-10,2;CL:0000738,6.24e-08,136;CL:0002567,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.82e-08;53 | |ontology_enrichment_development_v019=CL:0000051;1.82e-08;53 | ||
|ontology_enrichment_disease=DOID:0060058!4.08e-15!10;DOID:2531!8.67e-11!51;DOID:0060083!8.67e-11!51 | |ontology_enrichment_disease=DOID:0060058!4.08e-15!10;DOID:2531!8.67e-11!51;DOID:0060083!8.67e-11!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.37e-17!7;UBERON:0002106!2.26e-10!3;UBERON:0004854!2.26e-10!3;UBERON:0009034!2.26e-10!3;UBERON:0002095!2.26e-10!3;UBERON:0004782!2.26e-10!3;UBERON:0003281!2.26e-10!3;UBERON:0009664!2.26e-10!3;UBERON:0002296!2.26e-10!3;UBERON:0005602!2.26e-10!3;UBERON:0001179!2.26e-10!3;UBERON:0006293!2.26e-10!3;UBERON:0002384!1.94e-09!375;UBERON:0002370!1.88e-08!4;UBERON:0005058!1.88e-08!4;UBERON:0009113!1.88e-08!4;UBERON:0003295!1.88e-08!4;UBERON:0005562!1.88e-08!4;UBERON:0002390!9.77e-07!102;UBERON:0003061!9.77e-07!102 | |ontology_enrichment_uberon=UBERON:0004177!7.37e-17!7;UBERON:0002106!2.26e-10!3;UBERON:0004854!2.26e-10!3;UBERON:0009034!2.26e-10!3;UBERON:0002095!2.26e-10!3;UBERON:0004782!2.26e-10!3;UBERON:0003281!2.26e-10!3;UBERON:0009664!2.26e-10!3;UBERON:0002296!2.26e-10!3;UBERON:0005602!2.26e-10!3;UBERON:0001179!2.26e-10!3;UBERON:0006293!2.26e-10!3;UBERON:0002384!1.94e-09!375;UBERON:0002370!1.88e-08!4;UBERON:0005058!1.88e-08!4;UBERON:0009113!1.88e-08!4;UBERON:0003295!1.88e-08!4;UBERON:0005562!1.88e-08!4;UBERON:0002390!9.77e-07!102;UBERON:0003061!9.77e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.89e-37;2!UBERON:0005058;1.89e-37;2!UBERON:0009113;1.89e-37;2!UBERON:0004177;1.21e-15;5!UBERON:0005057;1.21e-15;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.89e-37;2!UBERON:0005058;1.89e-37;2!UBERON:0009113;1.89e-37;2!UBERON:0004177;1.21e-15;5!UBERON:0005057;1.21e-15;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-19,4;UBERON:0005058,2.71e-19,4;UBERON:0009113,2.71e-19,4;UBERON:0003295,2.71e-19,4;UBERON:0005562,2.71e-19,4;UBERON:0003351,3.34e-13,6;UBERON:0004177,1.87e-11,7;UBERON:0005057,1.87e-11,7;UBERON:0000974,2.72e-08,10;UBERON:0003408,2.72e-08,10;UBERON:0001042,2.72e-08,10;UBERON:0009145,2.72e-08,10;UBERON:0006562,1.28e-07,11;UBERON:0009722,1.28e-07,11;UBERON:0007690,1.28e-07,11 | |||
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| ||
|short_description=p13@GM2A | |short_description=p13@GM2A | ||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p13@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GM2A_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | -48bp_to_ENST00000523466_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | E5RJD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.78e-12 | 52 |
lymphocyte of B lineage | 3.09e-12 | 24 |
pro-B cell | 3.09e-12 | 24 |
lymphocyte | 4.76e-12 | 53 |
common lymphoid progenitor | 4.76e-12 | 53 |
eosinophil | 2.07e-10 | 2 |
leukocyte | 6.24e-08 | 136 |
light melanocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.71e-19 | 4 |
hemolymphoid system gland | 2.71e-19 | 4 |
thymic region | 2.71e-19 | 4 |
pharyngeal gland | 2.71e-19 | 4 |
thymus primordium | 2.71e-19 | 4 |
pharyngeal epithelium | 3.34e-13 | 6 |
hemopoietic organ | 1.87e-11 | 7 |
immune organ | 1.87e-11 | 7 |
neck | 2.72e-08 | 10 |
gland of gut | 2.72e-08 | 10 |
chordate pharynx | 2.72e-08 | 10 |
pharyngeal region of foregut | 2.72e-08 | 10 |
pharynx | 1.28e-07 | 11 |
entire pharyngeal arch endoderm | 1.28e-07 | 11 |
early pharyngeal endoderm | 1.28e-07 | 11 |