FFCP PHASE1:Hg19::chr10:29924808..29924822,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:29924808..29924822,- | |||
|description=CAGE_peak_at_chr10:29924808..29924822,- | |description=CAGE_peak_at_chr10:29924808..29924822,- | ||
|id=chr10:29924808..29924822,- | |id=chr10:29924808..29924822,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;2.00e-08;4!CL:0000650;9.39e-08;2!CL:1000500;9.39e-08;2!CL:1000618;9.39e-08;2!CL:1001318;9.39e-08;2!CL:0002173;9.39e-08;2 | |ontology_enrichment_celltype_v019=CL:0000669;2.00e-08;4!CL:0000650;9.39e-08;2!CL:1000500;9.39e-08;2!CL:1000618;9.39e-08;2!CL:1001318;9.39e-08;2!CL:0002173;9.39e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000669,2.31e-08,4;CL:0000650,1.08e-07,2;CL:1000500,1.08e-07,2;CL:1000618,1.08e-07,2;CL:1001318,1.08e-07,2;CL:0002173,1.08e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.76e-10;31 | |ontology_enrichment_development_v019=UBERON:0003104;7.76e-10;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;8.36e-09;2 | |ontology_enrichment_disease_v019=DOID:4468;8.36e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,8.55e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.23e-10!347;UBERON:0000119!3.07e-08!312;UBERON:0002200!9.22e-08!11;UBERON:0006876!9.22e-08!11;UBERON:0000483!2.33e-07!309;UBERON:0005256!3.10e-07!143;UBERON:0000468!3.16e-07!659;UBERON:0003104!5.57e-07!238;UBERON:0009142!5.57e-07!238;UBERON:0003103!6.03e-07!69;UBERON:0000922!8.60e-07!612 | |ontology_enrichment_uberon=UBERON:0000481!3.23e-10!347;UBERON:0000119!3.07e-08!312;UBERON:0002200!9.22e-08!11;UBERON:0006876!9.22e-08!11;UBERON:0000483!2.33e-07!309;UBERON:0005256!3.10e-07!143;UBERON:0000468!3.16e-07!659;UBERON:0003104!5.57e-07!238;UBERON:0009142!5.57e-07!238;UBERON:0003103!6.03e-07!69;UBERON:0000922!8.60e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.53e-08;2!UBERON:0005090;3.53e-08;2!UBERON:0001630;3.53e-08;2!UBERON:0003567;9.39e-08;2!UBERON:0003838;9.39e-08;2!UBERON:0003586;9.39e-08;2!UBERON:0005169;9.39e-08;2!UBERON:0002321;9.39e-08;2!UBERON:0005215;9.39e-08;2!UBERON:0002303;9.39e-08;2!UBERON:0002319;9.39e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000341;3.53e-08;2!UBERON:0005090;3.53e-08;2!UBERON:0001630;3.53e-08;2!UBERON:0003567;9.39e-08;2!UBERON:0003838;9.39e-08;2!UBERON:0003586;9.39e-08;2!UBERON:0005169;9.39e-08;2!UBERON:0002321;9.39e-08;2!UBERON:0005215;9.39e-08;2!UBERON:0002303;9.39e-08;2!UBERON:0002319;9.39e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,2.51e-08,2;UBERON:0001630,2.51e-08,2;UBERON:0000341,3.23e-08,2;UBERON:0003567,1.08e-07,2;UBERON:0003838,1.08e-07,2;UBERON:0003586,1.08e-07,2;UBERON:0005169,1.08e-07,2;UBERON:0002321,1.08e-07,2;UBERON:0005215,1.08e-07,2;UBERON:0002303,1.08e-07,2;UBERON:0002319,1.08e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0.410623275218653,0.125542639594803,5.73100543109634,5.50073949314637,7.16268109954481,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,1.22895262313288,0.221729397462564,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.805658634218294,0,0.732186172644509,0,0,0.0892997282840798,0.673588117878509,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0.24666754841716,1.24484414159907,0.269421344139376,0,1.96764655938411,0.576175924479999,1.64025002283658,0.624320153660641,0.570471821544449,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0.491337269247072,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0,0.30648779579902,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.464775771478074,0.518305275076852,0.756962552626885,1.82488679537915,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,2.45976877086227,0.686271241194102,0.109750285408626,0,0,0,0.977424915930974,0,0,1.62302566965108,1.29149563659404,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12131084345361,0.43596006883328,1.0267360014933,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.587403472388222,2.40200396667599,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,2.1754700926492,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0.784349769176855,1.46139224653261,2.53323909342902,0,0.340187410553031,2.15915916102139,0,1.62567862526312,1.00337954770971,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.689182862422653,0.644521469209642,0.145016693914229,0.596586391912706,2.49289699810865,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.38126038784765,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.811641507850816,0,0,0,0.0982490410131212,1.07001315444375,0,0,0,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0.539210106883961,0.358042349351218,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,9.95720129770801,3.8165329287164,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0,0,0,0.30607276163049,0.31593289814244,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,3.13070500632772,0,1.04135843001079,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0.126621591911757,0.586654148204409,0,0.213452994739353,0,0.288180834308212,0,18.0174747755063,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,1.95497680890578,1.14580212005842,0.717873024576814,0.199679000498991,1.71690419254628,0.223171457441873,9.06976878570805,0,4.65983798109815,2.91497774536727,2.80213918495966,3.63979136812598,0.492137407573744,1.01607998478941,0,0,0.321506296930038,2.33817042215297,4.98528405635022,0,0,0,0,0,0.209818352539992,0.950403028674658,0.179287339332845,0,2.85878130549347,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,1.49976489554528,0.151649117541648,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0.754703705257725,0,0,0.151230923763239,0.621748802331122,0,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,16.9119402268045,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0.353909170043221,0,0,0,0,0.397832444232549,0.752103283492572,0,7.03362610109783,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0.351742488719241,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0.13154554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| ||
|short_description=p@chr10:29924808..29924822,- | |short_description=p@chr10:29924808..29924822,- | ||
}} | }} |
Latest revision as of 13:03, 23 July 2015
Short description: | p@chr10:29924808..29924822, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:29924808..29924822, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 2.31e-08 | 4 |
mesangial cell | 1.08e-07 | 2 |
kidney interstitial cell | 1.08e-07 | 2 |
juxtaglomerular complex cell | 1.08e-07 | 2 |
renal interstitial pericyte | 1.08e-07 | 2 |
extraglomerular mesangial cell | 1.08e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 2.51e-08 | 2 |
muscle organ | 2.51e-08 | 2 |
throat | 3.23e-08 | 2 |
abdomen connective tissue | 1.08e-07 | 2 |
abdominal segment connective tissue | 1.08e-07 | 2 |
trunk connective tissue | 1.08e-07 | 2 |
interstitial tissue | 1.08e-07 | 2 |
extraglomerular mesangium | 1.08e-07 | 2 |
kidney interstitium | 1.08e-07 | 2 |
juxtaglomerular apparatus | 1.08e-07 | 2 |
mesangium | 1.08e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.55e-09 | 2 |