FFCP PHASE1:Hg19::chr18:56246628..56246637,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-61bp_to_AL832018_5end | |association_with_transcript=-61bp_to_AL832018_5end | ||
|cluster_id=chr18:56246628..56246637,- | |||
|description=CAGE_peak_27_at_ALPK2_5end | |description=CAGE_peak_27_at_ALPK2_5end | ||
|id=chr18:56246628..56246637,- | |id=chr18:56246628..56246637,- | ||
|ontology_enrichment_celltype=CL:0000057!1.52e-13!75;CL:0002620!1.60e-11!23;CL:0000055!2.50e-11!180 | |ontology_enrichment_celltype=CL:0000057!1.52e-13!75;CL:0002620!1.60e-11!23;CL:0000055!2.50e-11!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.07e-15;23!CL:0000197;7.89e-12;6!CL:0000098;7.89e-12;6!CL:0002167;7.89e-12;6!CL:0000222;1.05e-08;1!CL:0000057;3.68e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;3.07e-15;23!CL:0000197;7.89e-12;6!CL:0000098;7.89e-12;6!CL:0002167;7.89e-12;6!CL:0000222;1.05e-08;1!CL:0000057;3.68e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.95e-15,23;CL:0000057,3.93e-12,76;CL:0000197,1.06e-11,6;CL:0000098,1.06e-11,6;CL:0002167,1.06e-11,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;8.87e-11;3!DOID:3369;1.05e-08;1!DOID:4235;1.05e-08;1!DOID:17;5.72e-07;5!DOID:450;5.72e-07;5!DOID:66;5.72e-07;5!DOID:423;5.72e-07;5!DOID:0080000;5.72e-07;5!DOID:11722;5.72e-07;5 | |ontology_enrichment_disease_v019=DOID:1192;8.87e-11;3!DOID:3369;1.05e-08;1!DOID:4235;1.05e-08;1!DOID:17;5.72e-07;5!DOID:450;5.72e-07;5!DOID:66;5.72e-07;5!DOID:423;5.72e-07;5!DOID:0080000;5.72e-07;5!DOID:11722;5.72e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:1192,5.15e-11,3;DOID:3369,7.75e-09,1;DOID:4235,1.22e-08,1;DOID:17,5.24e-07,5;DOID:450,5.24e-07,5;DOID:66,5.24e-07,5;DOID:423,5.24e-07,5;DOID:0080000,5.24e-07,5;DOID:11722,5.24e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.84e-08!40;UBERON:0001737!9.22e-08!9;UBERON:0002199!6.84e-07!45;UBERON:0002416!6.84e-07!45 | |ontology_enrichment_uberon=UBERON:0002097!2.84e-08!40;UBERON:0001737!9.22e-08!9;UBERON:0002199!6.84e-07!45;UBERON:0002416!6.84e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.05e-08;1!UBERON:0007195;1.05e-08;1!UBERON:0000026;1.05e-08;1!UBERON:0008784;1.05e-08;1!UBERON:0006058;1.05e-08;1!UBERON:0003663;1.05e-08;1!UBERON:0004256;1.05e-08;1!UBERON:0004708;1.05e-08;1!UBERON:0002101;1.05e-08;1!UBERON:0004709;1.05e-08;1!UBERON:0002529;1.05e-08;1!UBERON:0010538;1.05e-08;1!UBERON:0003661;1.05e-08;1!UBERON:0010890;1.05e-08;1!UBERON:0002471;1.05e-08;1!UBERON:0001383;1.05e-08;1!UBERON:0010758;1.05e-08;1!UBERON:0010707;1.05e-08;1!UBERON:0000978;1.05e-08;1!UBERON:0002103;1.05e-08;1!UBERON:0001665;1.05e-08;1!UBERON:0003823;1.05e-08;1!UBERON:0000154;1.05e-08;1!UBERON:0010709;1.05e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0001389;1.05e-08;1!UBERON:0007195;1.05e-08;1!UBERON:0000026;1.05e-08;1!UBERON:0008784;1.05e-08;1!UBERON:0006058;1.05e-08;1!UBERON:0003663;1.05e-08;1!UBERON:0004256;1.05e-08;1!UBERON:0004708;1.05e-08;1!UBERON:0002101;1.05e-08;1!UBERON:0004709;1.05e-08;1!UBERON:0002529;1.05e-08;1!UBERON:0010538;1.05e-08;1!UBERON:0003661;1.05e-08;1!UBERON:0010890;1.05e-08;1!UBERON:0002471;1.05e-08;1!UBERON:0001383;1.05e-08;1!UBERON:0010758;1.05e-08;1!UBERON:0010707;1.05e-08;1!UBERON:0000978;1.05e-08;1!UBERON:0002103;1.05e-08;1!UBERON:0001665;1.05e-08;1!UBERON:0003823;1.05e-08;1!UBERON:0000154;1.05e-08;1!UBERON:0010709;1.05e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.74e-09,1;UBERON:0001389,9.74e-09,1;UBERON:0000026,9.74e-09,1;UBERON:0008784,9.74e-09,1;UBERON:0006058,9.74e-09,1;UBERON:0003663,9.74e-09,1;UBERON:0004256,9.74e-09,1;UBERON:0004708,9.74e-09,1;UBERON:0002101,9.74e-09,1;UBERON:0004709,9.74e-09,1;UBERON:0002529,9.74e-09,1;UBERON:0010538,9.74e-09,1;UBERON:0003661,9.74e-09,1;UBERON:0010890,9.74e-09,1;UBERON:0002471,9.74e-09,1;UBERON:0001383,9.74e-09,1;UBERON:0004357,9.74e-09,1;UBERON:0004347,9.74e-09,1;UBERON:0005420,9.74e-09,1;UBERON:0005732,9.74e-09,1;UBERON:0010758,9.74e-09,1;UBERON:0010707,9.74e-09,1;UBERON:0000978,9.74e-09,1;UBERON:0002103,9.74e-09,1;UBERON:0001665,9.74e-09,1;UBERON:0003823,9.74e-09,1;UBERON:0000154,9.74e-09,1;UBERON:0010709,9.74e-09,1;UBERON:0005733,9.74e-09,1;UBERON:0005730,9.74e-09,1;UBERON:0007195,1.53e-08,1;UBERON:0002097,3.34e-08,41;UBERON:0002199,3.20e-07,46;UBERON:0002416,3.20e-07,46 | |||
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| ||
|short_description=p27@ALPK2 | |short_description=p27@ALPK2 | ||
}} | }} |
Latest revision as of 00:05, 20 September 2015
Short description: | p27@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_ALPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_AL832018_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.95e-15 | 23 |
fibroblast | 3.93e-12 | 76 |
receptor cell | 1.06e-11 | 6 |
sensory epithelial cell | 1.06e-11 | 6 |
olfactory epithelial cell | 1.06e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 9.74e-09 | 1 |
soleus muscle | 9.74e-09 | 1 |
appendage | 9.74e-09 | 1 |
lower limb segment | 9.74e-09 | 1 |
multi-limb segment region | 9.74e-09 | 1 |
hindlimb muscle | 9.74e-09 | 1 |
hindlimb zeugopod muscle | 9.74e-09 | 1 |
paired limb/fin | 9.74e-09 | 1 |
limb | 9.74e-09 | 1 |
pelvic appendage | 9.74e-09 | 1 |
limb segment | 9.74e-09 | 1 |
paired limb/fin segment | 9.74e-09 | 1 |
limb muscle | 9.74e-09 | 1 |
pelvic complex muscle | 9.74e-09 | 1 |
zeugopod | 9.74e-09 | 1 |
muscle of leg | 9.74e-09 | 1 |
paired limb/fin bud | 9.74e-09 | 1 |
limb bud | 9.74e-09 | 1 |
pelvic appendage bud | 9.74e-09 | 1 |
limb/fin field | 9.74e-09 | 1 |
subdivision of organism along appendicular axis | 9.74e-09 | 1 |
appendage girdle complex | 9.74e-09 | 1 |
leg | 9.74e-09 | 1 |
hindlimb | 9.74e-09 | 1 |
triceps surae | 9.74e-09 | 1 |
hindlimb zeugopod | 9.74e-09 | 1 |
posterior region of body | 9.74e-09 | 1 |
pelvic complex | 9.74e-09 | 1 |
limb field | 9.74e-09 | 1 |
hindlimb/pelvic fin field | 9.74e-09 | 1 |
stroma of bone marrow | 1.53e-08 | 1 |
skin of body | 3.34e-08 | 41 |
integument | 3.20e-07 | 46 |
integumental system | 3.20e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 5.15e-11 | 3 |
peripheral primitive neuroectodermal tumor | 7.75e-09 | 1 |
spindle cell sarcoma | 1.22e-08 | 1 |
musculoskeletal system disease | 5.24e-07 | 5 |
myotonic disease | 5.24e-07 | 5 |
muscle tissue disease | 5.24e-07 | 5 |
myopathy | 5.24e-07 | 5 |
muscular disease | 5.24e-07 | 5 |
myotonic dystrophy | 5.24e-07 | 5 |