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FFCP PHASE1:Hg19::chr1:23037323..23037338,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:23037323..23037338,+
|DHSsupport=supported 
|short_description=p1@EPHB2
|DPIdataset=robust
|description=CAGE_peak_1_at_EPHB2_5end
|association_with_transcript=0bp_to_ENST00000374625,ENST00000544305,NM_004442,NM_017449,uc001bge.2,uc001bgf.2,uc009vqj.1,uc010odu.1_5end
|EntrezGene=2048
|EntrezGene=2048
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=3393
|HGNC=3393
|TSSclassifier=strong
|UniProt=A6NJM0,Q6NVW1,P29323
|UniProt=A6NJM0,Q6NVW1,P29323
|association_with_transcript=0bp_to_ENST00000374625,ENST00000544305,NM_004442,NM_017449,uc001bge.2,uc001bgf.2,uc009vqj.1,uc010odu.1_5end
|cluster_id=chr1:23037323..23037338,+
|description=CAGE_peak_1_at_EPHB2_5end
|id=chr1:23037323..23037338,+
|ontology_enrichment_celltype=CL:0000222!6.36e-24!119;CL:0000220!5.34e-22!246;CL:0002321!8.72e-22!248;CL:0000213!2.62e-16!57;CL:0000215!2.62e-16!57;CL:0000115!1.79e-15!35;CL:0002078!5.01e-15!44;CL:0000066!2.16e-14!254;CL:0000055!4.51e-11!180;CL:0002139!6.47e-11!24;CL:1000449!9.86e-11!16;CL:1000497!1.45e-09!18;CL:0002518!1.45e-09!18;CL:0000071!1.48e-09!18;CL:0002546!1.48e-09!18;CL:0000183!1.68e-09!59;CL:0000076!2.02e-09!62;CL:0002681!9.72e-09!13;CL:0002584!9.72e-09!13;CL:0000393!1.89e-08!60;CL:0000211!1.89e-08!60;CL:0000192!2.90e-08!42;CL:0000514!2.90e-08!42;CL:1000507!2.96e-08!12;CL:1000494!2.96e-08!12;CL:0000187!5.76e-08!54;CL:0000359!2.28e-07!32;CL:0000680!2.80e-07!57;CL:0000056!2.80e-07!57;CL:0000355!2.80e-07!57
|ontology_enrichment_celltype_v019=CL:0000115;1.11e-13;36!CL:0002139;5.44e-11;24!CL:1000449;7.57e-11;15!CL:0002078;2.57e-10;45!CL:0000213;3.31e-10;58!CL:0000215;3.31e-10;58!CL:0000071;1.31e-09;18!CL:1000497;1.46e-09;17!CL:0002518;1.46e-09;17!CL:0002681;7.88e-09;12!CL:0002584;7.88e-09;12!CL:1000507;7.68e-08;10!CL:1000494;7.68e-08;10!CL:0000359;4.68e-07;32
|ontology_enrichment_celltype_v019_2=CL:0000222,7.46e-25,121;CL:0002321,1.15e-22,250;CL:0000213,4.90e-17,58;CL:0000215,4.90e-17,58;CL:0000115,4.34e-16,36;CL:0002078,1.07e-15,45;CL:0000066,3.85e-14,253;CL:0002139,5.51e-11,24;CL:1000449,7.69e-11,15;CL:0000071,1.29e-09,18;CL:0002546,1.29e-09,18;CL:1000497,1.36e-09,17;CL:0002518,1.36e-09,17;CL:0000076,4.73e-09,63;CL:0002681,7.98e-09,12;CL:0002584,7.98e-09,12;CL:0000393,1.22e-08,61;CL:0000211,1.22e-08,61;CL:0000192,1.90e-08,43;CL:0000514,1.90e-08,43;CL:0000187,3.77e-08,55;CL:1000507,7.62e-08,10;CL:1000494,7.62e-08,10;CL:0000680,1.86e-07,58;CL:0000056,1.86e-07,58;CL:0000355,1.86e-07,58;CL:0000359,2.07e-07,32
|ontology_enrichment_development_v019=CL:0002546;1.31e-09;18!CL:0000222;9.07e-08;121
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!3.97e-25!659;UBERON:0000467!4.79e-23!625;UBERON:0004111!7.03e-23!241;UBERON:0000480!1.27e-22!626;UBERON:0000922!2.19e-22!612;UBERON:0000483!4.79e-22!309;UBERON:0000119!6.82e-22!312;UBERON:0002050!1.34e-21!605;UBERON:0005423!1.34e-21!605;UBERON:0000923!2.54e-21!604;UBERON:0005291!2.54e-21!604;UBERON:0006598!2.54e-21!604;UBERON:0002532!2.54e-21!604;UBERON:0000477!3.58e-21!286;UBERON:0000025!1.39e-20!194;UBERON:0003914!1.43e-20!118;UBERON:0000481!1.02e-19!347;UBERON:0002049!1.26e-19!79;UBERON:0007798!1.26e-19!79;UBERON:0000055!1.62e-16!69;UBERON:0001981!6.41e-15!60;UBERON:0007500!6.41e-15!60;UBERON:0004537!6.41e-15!60;UBERON:0006965!6.41e-15!60;UBERON:0000490!5.17e-14!138;UBERON:0004872!3.80e-13!84;UBERON:0004535!1.20e-12!110;UBERON:0001637!2.71e-12!42;UBERON:0003509!2.71e-12!42;UBERON:0004572!2.71e-12!42;UBERON:0000064!3.90e-12!219;UBERON:0001009!9.41e-12!113;UBERON:0000475!3.16e-11!365;UBERON:0004211!9.86e-11!16;UBERON:0001285!9.86e-11!16;UBERON:0007684!9.86e-11!16;UBERON:0003220!9.86e-11!16;UBERON:0004208!9.86e-11!16;UBERON:0006555!4.52e-10!17;UBERON:0005103!4.52e-10!17;UBERON:0000083!4.52e-10!17;UBERON:0009201!4.52e-10!17;UBERON:0004819!4.52e-10!17;UBERON:0006553!4.52e-10!17;UBERON:0003074!4.52e-10!17;UBERON:0003060!4.52e-10!17;UBERON:0000058!7.81e-10!26;UBERON:0004573!7.95e-10!33;UBERON:0004571!7.95e-10!33;UBERON:0005256!8.11e-10!143;UBERON:0001986!1.48e-09!18;UBERON:0004638!1.48e-09!18;UBERON:0004852!1.48e-09!18;UBERON:0000487!1.62e-09!22;UBERON:0000080!2.38e-09!18;UBERON:0002120!2.38e-09!18;UBERON:0004875!2.38e-09!18;UBERON:0005721!2.38e-09!18;UBERON:0005754!2.38e-09!18;UBERON:0007297!2.38e-09!18;UBERON:0000353!9.07e-09!17;UBERON:0000062!9.11e-09!511;UBERON:0001225!9.72e-09!13;UBERON:0008987!9.72e-09!13;UBERON:0009773!2.96e-08!12;UBERON:0001231!2.96e-08!12;UBERON:0004810!2.96e-08!12;UBERON:0000033!3.42e-08!123;UBERON:0002104!8.62e-08!21;UBERON:0001851!9.94e-08!16;UBERON:0004876!1.21e-07!20;UBERON:0001456!1.61e-07!21;UBERON:0001801!1.64e-07!14;UBERON:0006914!1.91e-07!25;UBERON:0000019!1.94e-07!19;UBERON:0000047!1.94e-07!19;UBERON:0004088!1.94e-07!19;UBERON:0003072!1.94e-07!19;UBERON:0003071!1.94e-07!19;UBERON:0004128!1.94e-07!19;UBERON:0000970!2.05e-07!20;UBERON:0003103!2.53e-07!69;UBERON:0000947!2.87e-07!21;UBERON:0010191!2.87e-07!21;UBERON:0003887!2.93e-07!21;UBERON:0006554!3.03e-07!44;UBERON:0001032!3.18e-07!24;UBERON:0004456!3.18e-07!24;UBERON:0007625!3.22e-07!11;UBERON:0000153!3.89e-07!129;UBERON:0007811!3.89e-07!129;UBERON:0002346!4.58e-07!90;UBERON:0001008!4.95e-07!45;UBERON:0003075!5.98e-07!86;UBERON:0007284!5.98e-07!86;UBERON:0003104!6.69e-07!238;UBERON:0009142!6.69e-07!238;UBERON:0002100!6.84e-07!216;UBERON:0000020!7.37e-07!23;UBERON:0003064!7.91e-07!37;UBERON:0001134!8.23e-07!61;UBERON:0002036!8.23e-07!61;UBERON:0003082!8.23e-07!61;UBERON:0002385!8.51e-07!63;UBERON:0001015!8.51e-07!63;UBERON:0000383!8.51e-07!63
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|short_description=p1@EPHB2
}}
}}

Latest revision as of 07:04, 16 September 2015

Short description:p1@EPHB2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_EPHB2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000374625, ENST00000544305, NM_004442, NM_017449, uc001bge.2, uc001bgf.2, uc009vqj.1, uc010odu.1_5end
EntrezGene:EPHB2
HGNC: 3393
UniProt: A6NJM0Q6NVW1P29323
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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