FFCP PHASE1:Hg19::chr15:81176511..81176526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:81176511..81176526,+ | |||
|coexpression_cluster_id=C387 | |coexpression_cluster_id=C387 | ||
|description=CAGE_peak_at_chr15:81176511..81176526,+ | |description=CAGE_peak_at_chr15:81176511..81176526,+ | ||
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|ontology_enrichment_celltype=CL:0000057!5.55e-22!75;CL:0000055!5.70e-21!180;CL:0002620!3.63e-10!23;CL:0002334!5.48e-10!12;CL:0000048!8.61e-10!430;CL:0000723!2.51e-09!436;CL:0000034!9.89e-09!444;CL:0000499!2.25e-08!27;CL:0000192!2.54e-07!42;CL:0000514!2.54e-07!42;CL:1000306!5.02e-07!4;CL:0002547!5.02e-07!4;CL:0000680!6.00e-07!57;CL:0000056!6.00e-07!57;CL:0000355!6.00e-07!57 | |ontology_enrichment_celltype=CL:0000057!5.55e-22!75;CL:0000055!5.70e-21!180;CL:0002620!3.63e-10!23;CL:0002334!5.48e-10!12;CL:0000048!8.61e-10!430;CL:0000723!2.51e-09!436;CL:0000034!9.89e-09!444;CL:0000499!2.25e-08!27;CL:0000192!2.54e-07!42;CL:0000514!2.54e-07!42;CL:1000306!5.02e-07!4;CL:0002547!5.02e-07!4;CL:0000680!6.00e-07!57;CL:0000056!6.00e-07!57;CL:0000355!6.00e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002579;5.33e-15;3!CL:0002615;9.91e-15;3!CL:0000135;3.51e-14;3!CL:0000388;3.51e-14;3!CL:0002334;1.62e-13;12!CL:0000136;1.74e-12;13!CL:0002617;2.43e-10;2!CL:0000057;1.00e-08;73!CL:0002620;2.86e-08;23!CL:0002580;6.18e-07;3!CL:0000214;8.54e-07;3 | |ontology_enrichment_celltype_v019=CL:0002579;5.33e-15;3!CL:0002615;9.91e-15;3!CL:0000135;3.51e-14;3!CL:0000388;3.51e-14;3!CL:0002334;1.62e-13;12!CL:0000136;1.74e-12;13!CL:0002617;2.43e-10;2!CL:0000057;1.00e-08;73!CL:0002620;2.86e-08;23!CL:0002580;6.18e-07;3!CL:0000214;8.54e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.32e-25,76;CL:0002579,4.88e-15,3;CL:0002615,1.06e-14,3;CL:0000135,2.63e-14,3;CL:0000388,2.63e-14,3;CL:0002334,1.41e-13,12;CL:0000136,1.00e-10,15;CL:0002617,2.32e-10,2;CL:0002620,3.70e-08,23;CL:0000134,1.02e-07,354;CL:0002320,2.02e-07,361;CL:0002580,5.66e-07,3;CL:0000214,7.38e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!5.63e-08!5;DOID:450!5.63e-08!5;DOID:66!5.63e-08!5;DOID:423!5.63e-08!5;DOID:0080000!5.63e-08!5;DOID:11722!5.63e-08!5 | |ontology_enrichment_disease=DOID:17!5.63e-08!5;DOID:450!5.63e-08!5;DOID:66!5.63e-08!5;DOID:423!5.63e-08!5;DOID:0080000!5.63e-08!5;DOID:11722!5.63e-08!5 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.36e-11!6;UBERON:0002358!2.36e-11!6;UBERON:0003684!2.36e-11!6;UBERON:0001178!2.36e-11!6;UBERON:0004457!7.20e-09!12;UBERON:0000042!7.20e-09!12;UBERON:0002097!3.91e-08!40;UBERON:0000415!5.02e-07!4;UBERON:0007240!5.02e-07!4;UBERON:0005742!5.02e-07!4;UBERON:0005734!5.02e-07!4;UBERON:0004664!5.02e-07!4;UBERON:0004663!5.02e-07!4 | |ontology_enrichment_uberon=UBERON:0003688!2.36e-11!6;UBERON:0002358!2.36e-11!6;UBERON:0003684!2.36e-11!6;UBERON:0001178!2.36e-11!6;UBERON:0004457!7.20e-09!12;UBERON:0000042!7.20e-09!12;UBERON:0002097!3.91e-08!40;UBERON:0000415!5.02e-07!4;UBERON:0007240!5.02e-07!4;UBERON:0005742!5.02e-07!4;UBERON:0005734!5.02e-07!4;UBERON:0004664!5.02e-07!4;UBERON:0004663!5.02e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.42e-32;9!UBERON:0000042;7.42e-32;9!UBERON:0003688;5.90e-28;6!UBERON:0002358;5.90e-28;6!UBERON:0003684;5.90e-28;6!UBERON:0001178;5.90e-28;6!UBERON:0007846;3.51e-14;3!UBERON:0000043;3.51e-14;3!UBERON:0007845;3.51e-14;3!UBERON:0005406;1.08e-10;2!UBERON:0000310;1.76e-07;10!UBERON:0001443;8.41e-07;11!UBERON:0006915;8.54e-07;3!UBERON:0007616;8.54e-07;3!UBERON:0002217;8.54e-07;3!UBERON:0002018;8.54e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;7.42e-32;9!UBERON:0000042;7.42e-32;9!UBERON:0003688;5.90e-28;6!UBERON:0002358;5.90e-28;6!UBERON:0003684;5.90e-28;6!UBERON:0001178;5.90e-28;6!UBERON:0007846;3.51e-14;3!UBERON:0000043;3.51e-14;3!UBERON:0007845;3.51e-14;3!UBERON:0005406;1.08e-10;2!UBERON:0000310;1.76e-07;10!UBERON:0001443;8.41e-07;11!UBERON:0006915;8.54e-07;3!UBERON:0007616;8.54e-07;3!UBERON:0002217;8.54e-07;3!UBERON:0002018;8.54e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.81e-28,6;UBERON:0002358,5.81e-28,6;UBERON:0003684,5.81e-28,6;UBERON:0001178,5.81e-28,6;UBERON:0004457,1.25e-23,12;UBERON:0000042,1.25e-23,12;UBERON:0007846,2.63e-14,3;UBERON:0000043,2.63e-14,3;UBERON:0007845,2.63e-14,3;UBERON:0005406,1.01e-10,2;UBERON:0004923,9.64e-09,66;UBERON:0002384,1.01e-07,371;UBERON:0000310,1.64e-07,10;UBERON:0002097,6.97e-07,41;UBERON:0006915,7.38e-07,3;UBERON:0007616,7.38e-07,3;UBERON:0002217,7.38e-07,3;UBERON:0002018,7.38e-07,3;UBERON:0001443,7.92e-07,11 | |||
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|short_description=p@chr15:81176511..81176526,+ | |short_description=p@chr15:81176511..81176526,+ | ||
}} | }} |
Latest revision as of 04:49, 25 July 2015
Short description: | p@chr15:81176511..81176526, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81176511..81176526, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.32e-25 | 76 |
omentum preadipocyte | 4.88e-15 | 3 |
adipocyte of omentum tissue | 1.06e-14 | 3 |
fibrocyte | 2.63e-14 | 3 |
tendon cell | 2.63e-14 | 3 |
preadipocyte | 1.41e-13 | 12 |
fat cell | 1.00e-10 | 15 |
adipocyte of breast | 2.32e-10 | 2 |
skin fibroblast | 3.70e-08 | 23 |
mesenchymal cell | 1.02e-07 | 354 |
connective tissue cell | 2.02e-07 | 361 |
preadipocyte of the breast | 5.66e-07 | 3 |
synovial cell | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.81e-28 | 6 |
peritoneum | 5.81e-28 | 6 |
abdominal cavity | 5.81e-28 | 6 |
visceral peritoneum | 5.81e-28 | 6 |
cavity lining | 1.25e-23 | 12 |
serous membrane | 1.25e-23 | 12 |
dense regular connective tissue | 2.63e-14 | 3 |
tendon | 2.63e-14 | 3 |
regular connective tissue | 2.63e-14 | 3 |
perirenal fat | 1.01e-10 | 2 |
organ component layer | 9.64e-09 | 66 |
connective tissue | 1.01e-07 | 371 |
breast | 1.64e-07 | 10 |
skin of body | 6.97e-07 | 41 |
stratified squamous epithelium | 7.38e-07 | 3 |
layer of synovial tissue | 7.38e-07 | 3 |
synovial joint | 7.38e-07 | 3 |
synovial membrane of synovial joint | 7.38e-07 | 3 |
chest | 7.92e-07 | 11 |