FFCP PHASE1:Hg19::chr8:32604401..32604404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:32604401..32604404,+ | |||
|description=CAGE_peak_at_chr8:32604401..32604404,+ | |description=CAGE_peak_at_chr8:32604401..32604404,+ | ||
|id=chr8:32604401..32604404,+ | |id=chr8:32604401..32604404,+ | ||
|ontology_enrichment_celltype=CL:0000095!2.18e-07!17;CL:0000123!2.18e-07!17;CL:0000243!3.79e-07!15;CL:0000125!3.79e-07!15;CL:0000030!3.79e-07!15;CL:0000339!3.79e-07!15 | |ontology_enrichment_celltype=CL:0000095!2.18e-07!17;CL:0000123!2.18e-07!17;CL:0000243!3.79e-07!15;CL:0000125!3.79e-07!15;CL:0000030!3.79e-07!15;CL:0000339!3.79e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.24e-46;3!CL:0000128;2.47e-20;7!CL:0000126;2.47e-20;7!CL:0000127;2.47e-20;7!CL:0000319;1.53e-16;1!CL:0000159;6.17e-09;2!CL:0000243;9.73e-09;15!CL:0000125;9.73e-09;15!CL:0000095;7.11e-08;17 | |ontology_enrichment_celltype_v019=CL:0002605;2.24e-46;3!CL:0000128;2.47e-20;7!CL:0000126;2.47e-20;7!CL:0000127;2.47e-20;7!CL:0000319;1.53e-16;1!CL:0000159;6.17e-09;2!CL:0000243;9.73e-09;15!CL:0000125;9.73e-09;15!CL:0000095;7.11e-08;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.17e-46,3;CL:0000128,3.22e-20,7;CL:0000126,3.22e-20,7;CL:0000127,3.22e-20,7;CL:0002453,3.22e-20,7;CL:0000319,8.86e-17,1;CL:0000159,4.70e-09,2;CL:0000243,1.08e-08,15;CL:0000125,1.08e-08,15;CL:0000030,1.08e-08,15;CL:0000339,1.08e-08,15;CL:0000095,7.81e-08,17;CL:0000123,7.81e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000339;9.73e-09;15 | |ontology_enrichment_development_v019=CL:0000339;9.73e-09;15 | ||
|ontology_enrichment_disease=DOID:1749!1.33e-09!14;DOID:0050687!1.00e-08!143;DOID:14566!7.08e-08!239;DOID:162!5.83e-07!235 | |ontology_enrichment_disease=DOID:1749!1.33e-09!14;DOID:0050687!1.00e-08!143;DOID:14566!7.08e-08!239;DOID:162!5.83e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:6193;5.52e-17;1!DOID:3030;1.53e-16;1!DOID:1749;2.13e-10;14!DOID:3350;3.71e-09;2!DOID:3910;6.17e-09;2 | |ontology_enrichment_disease_v019=DOID:6193;5.52e-17;1!DOID:3030;1.53e-16;1!DOID:1749;2.13e-10;14!DOID:3350;3.71e-09;2!DOID:3910;6.17e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,6.47e-17,1;DOID:3030,8.86e-17,1;DOID:1749,1.90e-10,14;DOID:3350,4.02e-09,2;DOID:3910,7.49e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.17e-09;2!UBERON:0002173;6.17e-09;2!UBERON:0002186;6.17e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0004903;6.17e-09;2!UBERON:0002173;6.17e-09;2!UBERON:0002186;6.17e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.49e-09,2;UBERON:0002173,7.49e-09,2;UBERON:0002186,7.49e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,2.28988789704845,1.09499540058307,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,1.31693286264251,0.919463387397059,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0.601519410909855,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.384380134730212,0.510450849978337,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,1.13654458722565,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,1.137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,2.0638323896594,0,0,0,0,0.529536760149002,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.407712618220842,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0.235265819698172,0,0.144921028610825,0.298509605773748,0.233713309847224,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0,0.318593534327405,2.69881867298163,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0.76872455576384,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0.172214979660816,0.567515953566836,0,0,0,0.127894371303652,0.646948868380091,0,0,0.509197589862076,0.425149840203366,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,1.65157612686837,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.4582137370881,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,2.28988789704845,1.09499540058307,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,1.31693286264251,0.919463387397059,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0.601519410909855,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.384380134730212,0.510450849978337,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,1.13654458722565,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,1.137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,2.0638323896594,0,0,0,0,0.529536760149002,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.407712618220842,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0.235265819698172,0,0.144921028610825,0.298509605773748,0.233713309847224,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0,0.318593534327405,2.69881867298163,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0.76872455576384,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0.172214979660816,0.567515953566836,0,0,0,0.127894371303652,0.646948868380091,0,0,0.509197589862076,0.425149840203366,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,1.65157612686837,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.4582137370881,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:32604401..32604404,+ | |short_description=p@chr8:32604401..32604404,+ | ||
}} | }} |
Latest revision as of 18:00, 31 July 2015
Short description: | p@chr8:32604401..32604404, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:32604401..32604404, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.17e-46 | 3 |
oligodendrocyte | 3.22e-20 | 7 |
macroglial cell | 3.22e-20 | 7 |
astrocyte | 3.22e-20 | 7 |
oligodendrocyte precursor cell | 3.22e-20 | 7 |
mucus secreting cell | 8.86e-17 | 1 |
seromucus secreting cell | 4.70e-09 | 2 |
glial cell (sensu Vertebrata) | 1.08e-08 | 15 |
glial cell | 1.08e-08 | 15 |
glioblast | 1.08e-08 | 15 |
glioblast (sensu Vertebrata) | 1.08e-08 | 15 |
neuron associated cell | 7.81e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 7.81e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.49e-09 | 2 |
alveolar duct | 7.49e-09 | 2 |
bronchiole | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.47e-17 | 1 |
mucinous adenocarcinoma | 8.86e-17 | 1 |
squamous cell carcinoma | 1.90e-10 | 14 |
mesenchymal cell neoplasm | 4.02e-09 | 2 |
lung adenocarcinoma | 7.49e-09 | 2 |