FFCP PHASE1:Hg19::chr19:45815055..45815100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45815055..45815100,- | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_at_chr19:45815055..45815100,- | |description=CAGE_peak_at_chr19:45815055..45815100,- | ||
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|ontology_enrichment_celltype=CL:0000763!6.12e-14!112;CL:0000049!6.12e-14!112;CL:0000557!2.78e-11!71;CL:0002009!5.73e-11!65;CL:0000839!5.06e-10!70;CL:0002194!5.11e-10!63;CL:0000576!5.11e-10!63;CL:0000040!5.11e-10!63;CL:0000559!5.11e-10!63;CL:0000766!1.19e-09!76;CL:0002057!4.54e-08!42;CL:0000860!5.19e-07!45 | |ontology_enrichment_celltype=CL:0000763!6.12e-14!112;CL:0000049!6.12e-14!112;CL:0000557!2.78e-11!71;CL:0002009!5.73e-11!65;CL:0000839!5.06e-10!70;CL:0002194!5.11e-10!63;CL:0000576!5.11e-10!63;CL:0000040!5.11e-10!63;CL:0000559!5.11e-10!63;CL:0000766!1.19e-09!76;CL:0002057!4.54e-08!42;CL:0000860!5.19e-07!45 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.55e-07;4!UBERON:0007284;1.55e-07;4 | |ontology_enrichment_development_v019=UBERON:0005062;1.55e-07;4!UBERON:0007284;1.55e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;3.93e-08;31!DOID:114;5.24e-07;2 | |ontology_enrichment_disease_v019=DOID:8692;3.93e-08;31!DOID:114;5.24e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.78e-08,31;DOID:114,7.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002405!2.14e-14!115;UBERON:0001474!3.48e-13!86;UBERON:0004765!9.18e-13!101;UBERON:0001434!9.18e-13!101;UBERON:0002371!1.33e-12!80;UBERON:0002193!3.98e-11!112;UBERON:0002390!9.84e-11!102;UBERON:0003061!9.84e-11!102;UBERON:0002204!1.45e-10!167 | |ontology_enrichment_uberon=UBERON:0002405!2.14e-14!115;UBERON:0001474!3.48e-13!86;UBERON:0004765!9.18e-13!101;UBERON:0001434!9.18e-13!101;UBERON:0002371!1.33e-12!80;UBERON:0002193!3.98e-11!112;UBERON:0002390!9.84e-11!102;UBERON:0003061!9.84e-11!102;UBERON:0002204!1.45e-10!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.85e-10;3!UBERON:0003978;6.37e-10;3!UBERON:0000946;6.37e-10;3!UBERON:0007100;1.64e-08;25!UBERON:0005090;4.96e-08;2!UBERON:0001630;4.96e-08;2!UBERON:0000341;3.30e-07;2!UBERON:0002081;3.85e-07;2!UBERON:0002133;5.24e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004151;2.85e-10;3!UBERON:0003978;6.37e-10;3!UBERON:0000946;6.37e-10;3!UBERON:0007100;1.64e-08;25!UBERON:0005090;4.96e-08;2!UBERON:0001630;4.96e-08;2!UBERON:0000341;3.30e-07;2!UBERON:0002081;3.85e-07;2!UBERON:0002133;5.24e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.86e-10,3;UBERON:0003978,6.80e-10,3;UBERON:0009751,6.80e-10,3;UBERON:0000946,6.80e-10,3;UBERON:0002523,6.80e-10,3;UBERON:0005983,6.80e-10,3;UBERON:0002165,6.80e-10,3;UBERON:0002062,6.80e-10,3;UBERON:0007280,6.80e-10,3;UBERON:0005090,4.97e-08,2;UBERON:0001630,4.97e-08,2;UBERON:0007100,1.07e-07,27;UBERON:0000341,3.21e-07,2;UBERON:0002081,3.86e-07,2;UBERON:0010227,3.86e-07,2;UBERON:0002133,5.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0.587200878669695,0,0.200544447470142,0.217010870715852,0.895661896959697,1.29557466407592,0.515151135268373,0.872389432677388,0,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.768482119587302,0.47296445977717,0.344745680736619,0.645484683583826,0,0.564727018627814,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0,0,0,0,0,0.75374599577023,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0.633765858935825,0.425208599930087,0.209658645508376,0.561643155732475,0.300353785683013,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0,5.56661070865279,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.125118519871964,0.277064115484183,2.19488810440419,3.37136575378922,0.150238058906597,0,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.2347220339942,1.47008711385542,1.26755034821831,0,0,0,0.491953754172454,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,1.47798971368783,0.528290604079356,0.207328115540772,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0.1466765716419,0,0,0,0,0,4.37252536245642,1.41849132023278,5.06202140130589,0,1.62786481617433,0,0.65147236858747,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.716243852959582,0.224170287987055,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,1.83138929636687,2.55779449753823,0,0,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0.580066775656914,0.255679882248303,0.534192213880424,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.38126038784765,0,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.423347165447766,1.29848776109822,0,0,0,0,0,0,0.403599414382095,2.12923118845163,0,4.60861146462687,5.5919026973104,6.17341824334061,0,0,0,0.811367035427949,15.3213105278997,2.81974010175699,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,5.11572370226872,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,1.84451123510448,1.88491053260521,0,0,0,0,0,2.19772358953035,4.48771541130422,0,0.19606253431774,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,43.3391929541346,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,2.71569246167574,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0721064139948,4.12488763221031,1.43574604915363,1.19807400299395,3.43380838509257,8.70368684023303,1.41085292222125,0,1.16495949527454,1.10296455230113,0.741742725430498,0.471824806979294,0,0,0,0,0,0,0,0.2249738915515,3.86900977278975,0,0,0,0.104909176269996,0,0,0,5.00286728461357,17.8764831998667,0,0,0,0,0,0.410462603746695,0,1.69968137280189,0,1.32506888912221,0,0.13223260174269,0,1.40963004463334,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,2.61704630809351,0,0,0,0,0.106691729694141,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0,0.20170506870352,0,0.523813388962845,0,0.739280431085226,0,0,0,0,0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| ||
|short_description=p@chr19:45815055..45815100,- | |short_description=p@chr19:45815055..45815100,- | ||
}} | }} |
Latest revision as of 14:55, 27 July 2015
Short description: | p@chr19:45815055..45815100, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45815055..45815100, - |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.86e-10 | 3 |
valve | 6.80e-10 | 3 |
cardiac mesenchyme | 6.80e-10 | 3 |
cardial valve | 6.80e-10 | 3 |
tunica intima | 6.80e-10 | 3 |
heart layer | 6.80e-10 | 3 |
endocardium | 6.80e-10 | 3 |
endocardial cushion | 6.80e-10 | 3 |
presumptive endocardium | 6.80e-10 | 3 |
muscle structure | 4.97e-08 | 2 |
muscle organ | 4.97e-08 | 2 |
primary circulatory organ | 1.07e-07 | 27 |
throat | 3.21e-07 | 2 |
cardiac atrium | 3.86e-07 | 2 |
future cardiac atrium | 3.86e-07 | 2 |
atrioventricular valve | 5.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.78e-08 | 31 |
heart disease | 7.12e-07 | 2 |