FFCP PHASE1:Hg19::chr11:2016915..2016943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-112bp_to_BC010185_5end | |association_with_transcript=-112bp_to_BC010185_5end | ||
|cluster_id=chr11:2016915..2016943,- | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_24_at_H19_5end | |description=CAGE_peak_24_at_H19_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | |ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.50e-18;19!CL:0000680;5.48e-11;7!CL:0000056;2.28e-09;4!CL:0002577;5.53e-09;3!CL:0002541;1.15e-08;3!CL:0000188;3.19e-08;9!CL:0000515;1.40e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;3.50e-18;19!CL:0000680;5.48e-11;7!CL:0000056;2.28e-09;4!CL:0002577;5.53e-09;3!CL:0002541;1.15e-08;3!CL:0000188;3.19e-08;9!CL:0000515;1.40e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.28e-18,19;CL:0000515,2.45e-09,4;CL:0002577,5.61e-09,3;CL:0002541,1.01e-08,3;CL:0000188,3.34e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000515;2.28e-09;4 | |ontology_enrichment_development_v019=CL:0000515;2.28e-09;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.02e-13!14;UBERON:0000158!1.02e-13!14;UBERON:0000478!6.25e-12!24;UBERON:0001737!7.75e-12!9;UBERON:0001557!7.69e-11!19;UBERON:0003124!2.73e-10!7;UBERON:0004923!6.87e-10!57;UBERON:0003104!3.63e-09!238;UBERON:0009142!3.63e-09!238;UBERON:0000481!1.37e-07!347;UBERON:0004921!2.40e-07!129;UBERON:0004185!2.40e-07!129;UBERON:0000077!2.74e-07!130;UBERON:0004119!4.20e-07!169;UBERON:0000925!4.20e-07!169;UBERON:0006595!4.20e-07!169 | |ontology_enrichment_uberon=UBERON:0005631!1.02e-13!14;UBERON:0000158!1.02e-13!14;UBERON:0000478!6.25e-12!24;UBERON:0001737!7.75e-12!9;UBERON:0001557!7.69e-11!19;UBERON:0003124!2.73e-10!7;UBERON:0004923!6.87e-10!57;UBERON:0003104!3.63e-09!238;UBERON:0009142!3.63e-09!238;UBERON:0000481!1.37e-07!347;UBERON:0004921!2.40e-07!129;UBERON:0004185!2.40e-07!129;UBERON:0000077!2.74e-07!130;UBERON:0004119!4.20e-07!169;UBERON:0000925!4.20e-07!169;UBERON:0006595!4.20e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.42e-21;16!UBERON:0002036;1.42e-21;16!UBERON:0001737;4.72e-21;9!UBERON:0001557;4.72e-21;9!UBERON:0000478;6.70e-19;24!UBERON:0005631;2.19e-16;10!UBERON:0000158;2.19e-16;10!UBERON:0001987;3.97e-11;4!UBERON:0000305;8.22e-10;7!UBERON:0002385;1.37e-09;31!UBERON:0001015;1.37e-09;31!UBERON:0000383;1.37e-09;31!UBERON:0003124;1.15e-08;3!UBERON:0000920;1.15e-08;3!UBERON:0001723;2.09e-08;3!UBERON:0001033;2.09e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001134;1.42e-21;16!UBERON:0002036;1.42e-21;16!UBERON:0001737;4.72e-21;9!UBERON:0001557;4.72e-21;9!UBERON:0000478;6.70e-19;24!UBERON:0005631;2.19e-16;10!UBERON:0000158;2.19e-16;10!UBERON:0001987;3.97e-11;4!UBERON:0000305;8.22e-10;7!UBERON:0002385;1.37e-09;31!UBERON:0001015;1.37e-09;31!UBERON:0000383;1.37e-09;31!UBERON:0003124;1.15e-08;3!UBERON:0000920;1.15e-08;3!UBERON:0001723;2.09e-08;3!UBERON:0001033;2.09e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.40e-25,14;UBERON:0000158,1.40e-25,14;UBERON:0001737,4.47e-21,9;UBERON:0000478,6.36e-19,24;UBERON:0003124,3.91e-18,7;UBERON:0001557,2.01e-16,19;UBERON:0001987,4.09e-11,4;UBERON:0004340,4.09e-11,4;UBERON:0000305,8.24e-10,7;UBERON:0000920,1.01e-08,3;UBERON:0004871,1.63e-08,8;UBERON:0001723,2.15e-08,3;UBERON:0001033,2.15e-08,3;UBERON:0010056,2.15e-08,3;UBERON:0000072,3.28e-08,47;UBERON:0004119,3.36e-07,160;UBERON:0000925,3.36e-07,160;UBERON:0006595,3.36e-07,160;UBERON:0004923,7.36e-07,66 | |||
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| ||
|short_description=p24@H19 | |short_description=p24@H19 | ||
}} | }} |
Latest revision as of 06:15, 17 September 2015
Short description: | p24@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -112bp_to_BC010185_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.28e-18 | 19 |
skeletal muscle myoblast | 2.45e-09 | 4 |
placental epithelial cell | 5.61e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.01e-08 | 3 |
cell of skeletal muscle | 3.34e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.40e-25 | 14 |
membranous layer | 1.40e-25 | 14 |
larynx | 4.47e-21 | 9 |
extraembryonic structure | 6.36e-19 | 24 |
chorion | 3.91e-18 | 7 |
upper respiratory tract | 2.01e-16 | 19 |
placenta | 4.09e-11 | 4 |
allantois | 4.09e-11 | 4 |
amnion | 8.24e-10 | 7 |
egg chorion | 1.01e-08 | 3 |
somatic layer of lateral plate mesoderm | 1.63e-08 | 8 |
tongue | 2.15e-08 | 3 |
gustatory system | 2.15e-08 | 3 |
future tongue | 2.15e-08 | 3 |
segment of respiratory tract | 3.28e-08 | 47 |
endoderm-derived structure | 3.36e-07 | 160 |
endoderm | 3.36e-07 | 160 |
presumptive endoderm | 3.36e-07 | 160 |
organ component layer | 7.36e-07 | 66 |