FFCP PHASE1:Hg19::chr12:53497240..53497249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8435 | |EntrezGene=8435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11178 | |HGNC=11178 | ||
|TSSclassifier=strong | |||
|UniProt=O75908 | |UniProt=O75908 | ||
|association_with_transcript=-24bp_to_NM_003578,uc001sbv.2,uc009zms.2_5end | |association_with_transcript=-24bp_to_NM_003578,uc001sbv.2,uc009zms.2_5end | ||
|cluster_id=chr12:53497240..53497249,+ | |||
|coexpression_cluster_id=C3294 | |coexpression_cluster_id=C3294 | ||
|description=CAGE_peak_3_at_SOAT2_5end | |description=CAGE_peak_3_at_SOAT2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.65e-17!5;CL:0000181!3.00e-13!12;CL:0000417!3.00e-13!12;CL:0000668!3.00e-13!12;CL:0000414!3.00e-13!12;CL:0000412!3.00e-13!12;CL:0000182!3.00e-13!12;CL:0002563!2.15e-10!4;CL:0000148!4.90e-09!10;CL:0000541!4.90e-09!10;CL:0000223!2.93e-07!59 | |ontology_enrichment_celltype=CL:0002322!1.65e-17!5;CL:0000181!3.00e-13!12;CL:0000417!3.00e-13!12;CL:0000668!3.00e-13!12;CL:0000414!3.00e-13!12;CL:0000412!3.00e-13!12;CL:0000182!3.00e-13!12;CL:0002563!2.15e-10!4;CL:0000148!4.90e-09!10;CL:0000541!4.90e-09!10;CL:0000223!2.93e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-29;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.33e-29;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-29,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.24e-50;11!UBERON:0009497;2.86e-42;13!UBERON:0001041;1.60e-18;30!UBERON:0003104;6.95e-18;31 | |ontology_enrichment_development_v019=UBERON:0004161;7.24e-50;11!UBERON:0009497;2.86e-42;13!UBERON:0001041;1.60e-18;30!UBERON:0003104;6.95e-18;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;7.50e-09;39 | |ontology_enrichment_disease_v019=DOID:7;7.50e-09;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,1.99e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!8.95e-13!19;UBERON:0006925!8.95e-13!19;UBERON:0008836!8.95e-13!19;UBERON:0008835!5.16e-11!22;UBERON:0003894!5.16e-11!22;UBERON:0009854!1.58e-10!23;UBERON:0003929!1.95e-10!54;UBERON:0001242!2.15e-10!4;UBERON:0001262!2.15e-10!4;UBERON:0004786!2.15e-10!4;UBERON:0004808!2.15e-10!4;UBERON:0001277!2.15e-10!4;UBERON:0007499!1.13e-09!25;UBERON:0009497!1.13e-09!25;UBERON:0000015!1.13e-09!25;UBERON:0002423!1.13e-09!25;UBERON:0006235!1.13e-09!25;UBERON:0004161!1.13e-09!25;UBERON:0005057!2.70e-09!26;UBERON:0009856!2.70e-09!26;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0003350!1.72e-08!5;UBERON:0000160!2.12e-08!27;UBERON:0002365!9.11e-08!31;UBERON:0002330!9.11e-08!31;UBERON:0001007!6.30e-07!155;UBERON:0001555!6.30e-07!155;UBERON:0007026!6.30e-07!155;UBERON:0002368!7.40e-07!35 | |ontology_enrichment_uberon=UBERON:0002107!8.95e-13!19;UBERON:0006925!8.95e-13!19;UBERON:0008836!8.95e-13!19;UBERON:0008835!5.16e-11!22;UBERON:0003894!5.16e-11!22;UBERON:0009854!1.58e-10!23;UBERON:0003929!1.95e-10!54;UBERON:0001242!2.15e-10!4;UBERON:0001262!2.15e-10!4;UBERON:0004786!2.15e-10!4;UBERON:0004808!2.15e-10!4;UBERON:0001277!2.15e-10!4;UBERON:0007499!1.13e-09!25;UBERON:0009497!1.13e-09!25;UBERON:0000015!1.13e-09!25;UBERON:0002423!1.13e-09!25;UBERON:0006235!1.13e-09!25;UBERON:0004161!1.13e-09!25;UBERON:0005057!2.70e-09!26;UBERON:0009856!2.70e-09!26;UBERON:0004921!1.07e-08!129;UBERON:0004185!1.07e-08!129;UBERON:0003350!1.72e-08!5;UBERON:0000160!2.12e-08!27;UBERON:0002365!9.11e-08!31;UBERON:0002330!9.11e-08!31;UBERON:0001007!6.30e-07!155;UBERON:0001555!6.30e-07!155;UBERON:0007026!6.30e-07!155;UBERON:0002368!7.40e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.70e-29;19!UBERON:0006925;4.70e-29;19!UBERON:0002423;3.63e-22;25!UBERON:0002365;1.28e-16;31!UBERON:0002330;1.28e-16;31!UBERON:0002368;5.58e-16;33!UBERON:0000949;1.73e-10;43!UBERON:0002417;1.07e-07;58!UBERON:0000916;1.07e-07;58!UBERON:0005172;8.27e-07;52!UBERON:0005173;8.27e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;4.70e-29;19!UBERON:0006925;4.70e-29;19!UBERON:0002423;3.63e-22;25!UBERON:0002365;1.28e-16;31!UBERON:0002330;1.28e-16;31!UBERON:0002368;5.58e-16;33!UBERON:0000949;1.73e-10;43!UBERON:0002417;1.07e-07;58!UBERON:0000916;1.07e-07;58!UBERON:0005172;8.27e-07;52!UBERON:0005173;8.27e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.30e-29,19;UBERON:0006925,4.30e-29,19;UBERON:0008836,4.30e-29,19;UBERON:0008835,3.56e-25,22;UBERON:0003894,3.56e-25,22;UBERON:0009854,4.27e-24,23;UBERON:0007499,3.40e-22,25;UBERON:0009497,3.40e-22,25;UBERON:0000015,3.40e-22,25;UBERON:0002423,3.40e-22,25;UBERON:0006235,3.40e-22,25;UBERON:0004161,3.40e-22,25;UBERON:0009856,2.36e-21,26;UBERON:0002365,5.88e-18,31;UBERON:0002330,5.88e-18,31;UBERON:0002368,6.19e-16,35;UBERON:0000949,1.92e-12,45;UBERON:0003929,2.13e-10,54;UBERON:0005172,2.13e-10,54;UBERON:0005173,2.13e-10,54;UBERON:0002530,1.57e-09,59;UBERON:0002417,2.26e-09,60;UBERON:0000916,2.26e-09,60;UBERON:0005911,6.95e-07,82 | |||
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|short_description=p3@SOAT2 | |short_description=p3@SOAT2 | ||
}} | }} |
Latest revision as of 01:45, 19 September 2015
Short description: | p3@SOAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SOAT2_5end |
Coexpression cluster: | C3294_smallcell_hepatoblastoma_thyroid_hepatocellular_Melanocyte_liver_small |
Association with transcript: | -24bp_to_NM_003578, uc001sbv.2, uc009zms.2_5end |
EntrezGene: | SOAT2 |
HGNC: | 11178 |
UniProt: | O75908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-29 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.30e-29 | 19 |
digestive gland | 4.30e-29 | 19 |
liver bud | 4.30e-29 | 19 |
hepatic diverticulum | 3.56e-25 | 22 |
liver primordium | 3.56e-25 | 22 |
digestive tract diverticulum | 4.27e-24 | 23 |
epithelial sac | 3.40e-22 | 25 |
epithelium of foregut-midgut junction | 3.40e-22 | 25 |
anatomical boundary | 3.40e-22 | 25 |
hepatobiliary system | 3.40e-22 | 25 |
foregut-midgut junction | 3.40e-22 | 25 |
septum transversum | 3.40e-22 | 25 |
sac | 2.36e-21 | 26 |
exocrine gland | 5.88e-18 | 31 |
exocrine system | 5.88e-18 | 31 |
endocrine gland | 6.19e-16 | 35 |
endocrine system | 1.92e-12 | 45 |
gut epithelium | 2.13e-10 | 54 |
abdomen element | 2.13e-10 | 54 |
abdominal segment element | 2.13e-10 | 54 |
gland | 1.57e-09 | 59 |
abdominal segment of trunk | 2.26e-09 | 60 |
abdomen | 2.26e-09 | 60 |
endo-epithelium | 6.95e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.99e-09 | 39 |