FFCP PHASE1:Hg19::chr9:100732599..100732614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:100732599..100732614,+ | |||
|coexpression_cluster_id=C419 | |coexpression_cluster_id=C419 | ||
|description=CAGE_peak_at_chr9:100732599..100732614,+ | |description=CAGE_peak_at_chr9:100732599..100732614,+ | ||
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|ontology_enrichment_celltype=CL:0000084!4.54e-07!25;CL:0000827!4.54e-07!25;CL:0000037!6.16e-07!172;CL:0000566!6.16e-07!172 | |ontology_enrichment_celltype=CL:0000084!4.54e-07!25;CL:0000827!4.54e-07!25;CL:0000037!6.16e-07!172;CL:0000566!6.16e-07!172 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.17e-17;2 | |ontology_enrichment_development_v019=UBERON:0006965;1.17e-17;2 | ||
|ontology_enrichment_disease=DOID:2531!2.97e-23!51;DOID:0060083!2.97e-23!51;DOID:1036!3.20e-21!8;DOID:1240!1.15e-20!39;DOID:8692!1.07e-11!31;DOID:0050686!1.34e-07!137 | |ontology_enrichment_disease=DOID:2531!2.97e-23!51;DOID:0060083!2.97e-23!51;DOID:1036!3.20e-21!8;DOID:1240!1.15e-20!39;DOID:8692!1.07e-11!31;DOID:0050686!1.34e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.32e-14!7;UBERON:0002370!8.65e-12!4;UBERON:0005058!8.65e-12!4;UBERON:0009113!8.65e-12!4;UBERON:0003295!8.65e-12!4;UBERON:0005562!8.65e-12!4;UBERON:0003351!3.77e-08!6 | |ontology_enrichment_uberon=UBERON:0004177!3.32e-14!7;UBERON:0002370!8.65e-12!4;UBERON:0005058!8.65e-12!4;UBERON:0009113!8.65e-12!4;UBERON:0003295!8.65e-12!4;UBERON:0005562!8.65e-12!4;UBERON:0003351!3.77e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.84e-66;2!UBERON:0005058;2.84e-66;2!UBERON:0009113;2.84e-66;2!UBERON:0004177;2.72e-27;5!UBERON:0005057;2.72e-27;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;2.84e-66;2!UBERON:0005058;2.84e-66;2!UBERON:0009113;2.84e-66;2!UBERON:0004177;2.72e-27;5!UBERON:0005057;2.72e-27;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.36e-34,4;UBERON:0005058,8.36e-34,4;UBERON:0009113,8.36e-34,4;UBERON:0003295,8.36e-34,4;UBERON:0005562,8.36e-34,4;UBERON:0003351,6.07e-23,6;UBERON:0004177,7.84e-20,7;UBERON:0005057,7.84e-20,7;UBERON:0000974,3.25e-14,10;UBERON:0003408,3.25e-14,10;UBERON:0001042,3.25e-14,10;UBERON:0009145,3.25e-14,10;UBERON:0006562,5.10e-13,11;UBERON:0009722,5.10e-13,11;UBERON:0007690,5.10e-13,11;UBERON:0008814,2.42e-08,18;UBERON:0001557,5.94e-08,19 | |||
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|short_description=p@chr9:100732599..100732614,+ | |short_description=p@chr9:100732599..100732614,+ | ||
}} | }} |
Latest revision as of 21:01, 31 July 2015
Short description: | p@chr9:100732599..100732614, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:100732599..100732614, + |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.36e-34 | 4 |
hemolymphoid system gland | 8.36e-34 | 4 |
thymic region | 8.36e-34 | 4 |
pharyngeal gland | 8.36e-34 | 4 |
thymus primordium | 8.36e-34 | 4 |
pharyngeal epithelium | 6.07e-23 | 6 |
hemopoietic organ | 7.84e-20 | 7 |
immune organ | 7.84e-20 | 7 |
neck | 3.25e-14 | 10 |
gland of gut | 3.25e-14 | 10 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
entire pharyngeal arch endoderm | 5.10e-13 | 11 |
early pharyngeal endoderm | 5.10e-13 | 11 |
pharyngeal arch system | 2.42e-08 | 18 |
upper respiratory tract | 5.94e-08 | 19 |