FFCP PHASE1:Hg19::chr1:27190343..27190365,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:27190343..27190365,-
|short_description=p4@uc010ofi.1
|description=CAGE_peak_4_at_uc010ofi.1_5end
|association_with_transcript=83bp_to_uc010ofi.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=83bp_to_uc010ofi.1_5end | |||
|cluster_id=chr1:27190343..27190365,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_4_at_uc010ofi.1_5end | |||
|id=chr1:27190343..27190365,- | |||
|ontology_enrichment_celltype=CL:0000066!1.83e-50!254;CL:0002076!1.19e-24!43;CL:0000223!7.98e-19!59;CL:0002368!7.32e-13!13;CL:0002159!9.85e-12!13;CL:0002251!2.07e-11!21;CL:0000063!1.38e-08!578;CL:0000622!2.36e-08!5;CL:0000082!3.66e-08!19;CL:0000244!8.82e-08!4;CL:0000731!8.82e-08!4;CL:0002202!1.43e-07!9;CL:0002632!1.43e-07!9;CL:1000497!3.52e-07!18;CL:0002518!3.52e-07!18;CL:0002327!6.01e-07!4;CL:0000154!7.61e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.89e-22;14!CL:0000244;3.74e-17;4!CL:0000731;3.74e-17;4!CL:0002076;8.97e-15;42!CL:0002621;4.31e-13;3!CL:0000622;1.50e-12;5!CL:0002166;2.28e-12;3!CL:0002251;7.78e-12;20!CL:0000154;1.78e-10;6!CL:0002077;2.41e-10;34!CL:0002327;1.00e-09;4!CL:0000575;1.15e-09;2!CL:0000317;6.68e-09;2!CL:1000448;6.68e-09;2!CL:0002308;6.68e-09;2!CL:0002140;6.68e-09;2!CL:0000362;1.36e-07;9!CL:0002368;1.91e-07;13!CL:0000240;4.92e-07;6!CL:0000311;4.92e-07;6!CL:0000079;4.92e-07;6!CL:0000237;4.92e-07;6!CL:0000150;5.24e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.86e-22,14;CL:0000066,5.67e-19,253;CL:0002076,3.92e-18,42;CL:0000244,3.83e-17,4;CL:0000731,3.83e-17,4;CL:0002621,3.98e-13,3;CL:0000622,1.37e-12,5;CL:0002166,1.91e-12,3;CL:0002077,3.04e-12,34;CL:0000223,3.58e-12,58;CL:0002251,8.34e-12,20;CL:0000154,1.65e-10,6;CL:0002327,9.30e-10,4;CL:0000575,1.06e-09,2;CL:0000317,4.47e-09,2;CL:1000448,4.47e-09,2;CL:0002308,4.47e-09,2;CL:0002140,4.47e-09,2;CL:0000362,1.13e-07,9;CL:0002368,1.89e-07,13;CL:0000240,4.59e-07,6;CL:0000311,4.59e-07,6;CL:0000079,4.59e-07,6;CL:0000237,4.59e-07,6;CL:0000036,4.59e-07,6;CL:0000357,4.59e-07,6;CL:0000114,4.59e-07,6;CL:0000150,4.99e-07,9;CL:0000076,8.47e-07,63;CL:0002577,9.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.39e-07;58!CL:0000357;4.92e-07;6!CL:0000114;4.92e-07;6 | |||
|ontology_enrichment_disease=DOID:305!5.95e-32!106;DOID:0050687!4.47e-21!143;DOID:1749!2.54e-15!14;DOID:162!6.22e-10!235;DOID:14566!2.20e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.87e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.84e-27!72;UBERON:0004119!4.05e-24!169;UBERON:0000925!4.05e-24!169;UBERON:0006595!4.05e-24!169;UBERON:0000065!4.45e-22!53;UBERON:0008947!4.96e-18!38;UBERON:0003258!4.96e-18!38;UBERON:0000072!1.23e-16!46;UBERON:0000077!9.77e-16!130;UBERON:0001007!2.07e-15!155;UBERON:0001555!2.07e-15!155;UBERON:0007026!2.07e-15!155;UBERON:0005153!1.58e-14!37;UBERON:0001041!2.81e-14!98;UBERON:0004921!7.19e-13!129;UBERON:0004185!7.19e-13!129;UBERON:0001737!8.93e-12!9;UBERON:0005911!1.27e-11!82;UBERON:0005157!3.40e-11!51;UBERON:0000161!7.51e-11!35;UBERON:0005178!2.57e-10!34;UBERON:0002224!2.57e-10!34;UBERON:0001557!4.16e-10!19;UBERON:0005181!7.10e-10!35;UBERON:0000166!7.73e-10!21;UBERON:0000064!1.14e-09!219;UBERON:0005910!3.10e-09!6;UBERON:0006554!3.23e-09!44;UBERON:0002048!3.81e-09!22;UBERON:0000117!3.81e-09!22;UBERON:0000171!3.81e-09!22;UBERON:0000170!3.81e-09!22;UBERON:0005597!3.81e-09!22;UBERON:0000118!3.81e-09!22;UBERON:0005631!5.58e-09!14;UBERON:0000158!5.58e-09!14;UBERON:0001008!6.91e-09!45;UBERON:0000464!7.21e-09!104;UBERON:0000062!7.34e-09!511;UBERON:0000365!1.59e-08!5;UBERON:0000466!2.27e-08!126;UBERON:0004807!2.63e-08!28;UBERON:0004802!3.66e-08!19;UBERON:0000115!3.66e-08!19;UBERON:0000165!7.73e-08!28;UBERON:0000930!7.73e-08!28;UBERON:0003729!1.41e-07!5;UBERON:0000058!2.69e-07!26;UBERON:0003100!2.96e-07!41;UBERON:0003104!4.22e-07!238;UBERON:0009142!4.22e-07!238;UBERON:0007196!4.58e-07!14;UBERON:0001558!4.58e-07!14;UBERON:0001911!6.01e-07!4;UBERON:0005333!6.01e-07!4;UBERON:0008425!6.01e-07!4;UBERON:0005311!6.01e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.41e-16;12!UBERON:0000365;9.73e-14;5!UBERON:0001949;4.31e-13;3!UBERON:0005910;1.86e-11;6!UBERON:0000165;6.43e-10;28!UBERON:0001911;1.00e-09;4!UBERON:0001708;2.16e-09;4!UBERON:0008895;2.16e-09;4!UBERON:0002419;6.68e-09;2!UBERON:0007771;6.68e-09;2!UBERON:0003297;6.68e-09;2!UBERON:0001821;6.68e-09;2!UBERON:0003487;6.68e-09;2!UBERON:0001820;6.68e-09;2!UBERON:0003729;8.00e-08;13!UBERON:0011159;1.34e-07;5!UBERON:0000161;4.60e-07;19!UBERON:0000166;4.60e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.90e-14,5;UBERON:0001949,3.98e-13,3;UBERON:0003102,6.82e-13,99;UBERON:0005910,1.89e-11,6;UBERON:0000033,8.41e-11,56;UBERON:0004119,1.39e-10,160;UBERON:0000925,1.39e-10,160;UBERON:0006595,1.39e-10,160;UBERON:0000166,3.65e-10,22;UBERON:0001911,9.30e-10,4;UBERON:0005333,9.30e-10,4;UBERON:0008425,9.30e-10,4;UBERON:0005311,9.30e-10,4;UBERON:0000153,1.84e-09,62;UBERON:0007811,1.84e-09,62;UBERON:0000165,1.89e-09,29;UBERON:0000930,1.89e-09,29;UBERON:0001708,1.89e-09,4;UBERON:0008895,1.89e-09,4;UBERON:0002419,4.47e-09,2;UBERON:0007771,4.47e-09,2;UBERON:0003297,4.47e-09,2;UBERON:0001821,4.47e-09,2;UBERON:0003487,4.47e-09,2;UBERON:0001820,4.47e-09,2;UBERON:0005089,4.47e-09,2;UBERON:0005088,4.47e-09,2;UBERON:0000161,4.62e-09,36;UBERON:0001004,1.76e-08,74;UBERON:0003729,7.60e-08,13;UBERON:0001444,1.11e-07,49;UBERON:0011159,1.21e-07,5 | |||
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| ||
|short_description=p4@uc010ofi.1 | |||
}} | }} |
Latest revision as of 06:41, 28 July 2015
Short description: | p4@uc010ofi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc010ofi.1_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 83bp_to_uc010ofi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 9.90e-14 | 5 |
gingival epithelium | 3.98e-13 | 3 |
surface structure | 6.82e-13 | 99 |
transitional epithelium | 1.89e-11 | 6 |
head | 8.41e-11 | 56 |
endoderm-derived structure | 1.39e-10 | 160 |
endoderm | 1.39e-10 | 160 |
presumptive endoderm | 1.39e-10 | 160 |
oral opening | 3.65e-10 | 22 |
mammary gland | 9.30e-10 | 4 |
mammary bud | 9.30e-10 | 4 |
mammary ridge | 9.30e-10 | 4 |
mammary placode | 9.30e-10 | 4 |
anterior region of body | 1.84e-09 | 62 |
craniocervical region | 1.84e-09 | 62 |
mouth | 1.89e-09 | 29 |
stomodeum | 1.89e-09 | 29 |
jaw skeleton | 1.89e-09 | 4 |
splanchnocranium | 1.89e-09 | 4 |
skin gland | 4.47e-09 | 2 |
epidermis gland | 4.47e-09 | 2 |
gland of integumental system | 4.47e-09 | 2 |
sebaceous gland | 4.47e-09 | 2 |
skin sebaceous gland | 4.47e-09 | 2 |
sweat gland | 4.47e-09 | 2 |
sweat gland placode | 4.47e-09 | 2 |
sebaceous gland placode | 4.47e-09 | 2 |
orifice | 4.62e-09 | 36 |
respiratory system | 1.76e-08 | 74 |
mouth mucosa | 7.60e-08 | 13 |
subdivision of head | 1.11e-07 | 49 |
primary subdivision of cranial skeletal system | 1.21e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.87e-07 | 14 |