FFCP PHASE1:Hg19::chr9:132427972..132428056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51450 | |EntrezGene=51450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21338 | |HGNC=21338 | ||
|TSSclassifier=strong | |||
|UniProt=Q99811 | |UniProt=Q99811 | ||
|association_with_transcript=52bp_to_ENST00000372469,NM_016307,uc004byh.2_5end | |association_with_transcript=52bp_to_ENST00000372469,NM_016307,uc004byh.2_5end | ||
|cluster_id=chr9:132427972..132428056,+ | |||
|description=CAGE_peak_1_at_PRRX2_5end | |description=CAGE_peak_1_at_PRRX2_5end | ||
|id=chr9:132427972..132428056,+ | |id=chr9:132427972..132428056,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.68e-32!180;CL:0000057!1.84e-23!75;CL:0002620!9.52e-12!23;CL:0000499!2.17e-08!27;CL:0002334!7.95e-08!12;CL:0000187!1.63e-07!54;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0000183!2.36e-07!59;CL:0000192!9.06e-07!42;CL:0000514!9.06e-07!42;CL:0000393!9.54e-07!60;CL:0000211!9.54e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.68e-32!180;CL:0000057!1.84e-23!75;CL:0002620!9.52e-12!23;CL:0000499!2.17e-08!27;CL:0002334!7.95e-08!12;CL:0000187!1.63e-07!54;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0000183!2.36e-07!59;CL:0000192!9.06e-07!42;CL:0000514!9.06e-07!42;CL:0000393!9.54e-07!60;CL:0000211!9.54e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.67e-13;23!CL:0000057;2.43e-09;73!CL:0002334;2.91e-09;12!CL:0000499;8.80e-08;28!CL:0000153;1.68e-07;9!CL:0000447;1.68e-07;9!CL:0000062;2.08e-07;9!CL:0002320;9.86e-07;188 | |ontology_enrichment_celltype_v019=CL:0002620;1.67e-13;23!CL:0000057;2.43e-09;73!CL:0002334;2.91e-09;12!CL:0000499;8.80e-08;28!CL:0000153;1.68e-07;9!CL:0000447;1.68e-07;9!CL:0000062;2.08e-07;9!CL:0002320;9.86e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.02e-24,76;CL:0002620,1.82e-13,23;CL:0002334,3.09e-09,12;CL:0000499,1.15e-07,28;CL:0000153,1.75e-07,9;CL:0000447,1.75e-07,9;CL:0000062,7.69e-07,11;CL:0000375,7.69e-07,11;CL:0000335,7.69e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;7.86e-07;11 | |ontology_enrichment_development_v019=CL:0000335;7.86e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.85e-15!95;UBERON:0000914!2.40e-14!83;UBERON:0002329!2.40e-14!83;UBERON:0003077!2.40e-14!83;UBERON:0003059!2.40e-14!83;UBERON:0007282!2.40e-14!83;UBERON:0009618!2.40e-14!83;UBERON:0007285!2.40e-14!83;UBERON:0004290!1.23e-11!70;UBERON:0002199!1.15e-10!45;UBERON:0002416!1.15e-10!45;UBERON:0000486!1.34e-10!82;UBERON:0002100!3.77e-09!216;UBERON:0003104!4.71e-09!238;UBERON:0009142!4.71e-09!238;UBERON:0002097!4.74e-09!40;UBERON:0002385!1.87e-08!63;UBERON:0001015!1.87e-08!63;UBERON:0000383!1.87e-08!63;UBERON:0000475!2.17e-08!365;UBERON:0001134!2.88e-08!61;UBERON:0002036!2.88e-08!61;UBERON:0003082!2.88e-08!61;UBERON:0005256!3.77e-08!143;UBERON:0000468!1.04e-07!659;UBERON:0000481!4.94e-07!347 | |ontology_enrichment_uberon=UBERON:0003102!3.85e-15!95;UBERON:0000914!2.40e-14!83;UBERON:0002329!2.40e-14!83;UBERON:0003077!2.40e-14!83;UBERON:0003059!2.40e-14!83;UBERON:0007282!2.40e-14!83;UBERON:0009618!2.40e-14!83;UBERON:0007285!2.40e-14!83;UBERON:0004290!1.23e-11!70;UBERON:0002199!1.15e-10!45;UBERON:0002416!1.15e-10!45;UBERON:0000486!1.34e-10!82;UBERON:0002100!3.77e-09!216;UBERON:0003104!4.71e-09!238;UBERON:0009142!4.71e-09!238;UBERON:0002097!4.74e-09!40;UBERON:0002385!1.87e-08!63;UBERON:0001015!1.87e-08!63;UBERON:0000383!1.87e-08!63;UBERON:0000475!2.17e-08!365;UBERON:0001134!2.88e-08!61;UBERON:0002036!2.88e-08!61;UBERON:0003082!2.88e-08!61;UBERON:0005256!3.77e-08!143;UBERON:0000468!1.04e-07!659;UBERON:0000481!4.94e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.83e-08;46!UBERON:0002416;1.83e-08;46!UBERON:0001434;3.05e-08;36!UBERON:0002097;3.76e-08;41!UBERON:0003102;1.31e-07;50!UBERON:0002384;1.87e-07;198!UBERON:0004457;3.35e-07;9!UBERON:0000042;3.35e-07;9!UBERON:0004905;4.61e-07;8!UBERON:0000982;4.61e-07;8!UBERON:0004770;4.61e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0002199;1.83e-08;46!UBERON:0002416;1.83e-08;46!UBERON:0001434;3.05e-08;36!UBERON:0002097;3.76e-08;41!UBERON:0003102;1.31e-07;50!UBERON:0002384;1.87e-07;198!UBERON:0004457;3.35e-07;9!UBERON:0000042;3.35e-07;9!UBERON:0004905;4.61e-07;8!UBERON:0000982;4.61e-07;8!UBERON:0004770;4.61e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.56e-14,99;UBERON:0002199,1.64e-12,46;UBERON:0002416,1.64e-12,46;UBERON:0002097,1.50e-10,41;UBERON:0007524,1.61e-10,73;UBERON:0002329,2.48e-10,71;UBERON:0003059,2.48e-10,71;UBERON:0007282,2.48e-10,71;UBERON:0004290,2.48e-10,71;UBERON:0009618,2.48e-10,71;UBERON:0003077,5.68e-10,72;UBERON:0007285,5.68e-10,72;UBERON:0007503,1.04e-09,78;UBERON:0000486,2.12e-09,83;UBERON:0004905,4.80e-07,8;UBERON:0000982,4.80e-07,8;UBERON:0004770,4.80e-07,8;UBERON:0001134,9.46e-07,62;UBERON:0002036,9.46e-07,62;UBERON:0003082,9.46e-07,62 | |||
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|short_description=p1@PRRX2 | |short_description=p1@PRRX2 | ||
}} | }} |
Latest revision as of 23:12, 15 September 2015
Short description: | p1@PRRX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000372469, NM_016307, uc004byh.2_5end |
EntrezGene: | PRRX2 |
HGNC: | 21338 |
UniProt: | Q99811 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.02e-24 | 76 |
skin fibroblast | 1.82e-13 | 23 |
preadipocyte | 3.09e-09 | 12 |
stromal cell | 1.15e-07 | 28 |
GAG secreting cell | 1.75e-07 | 9 |
carbohydrate secreting cell | 1.75e-07 | 9 |
osteoblast | 7.69e-07 | 11 |
osteoprogenitor cell | 7.69e-07 | 11 |
mesenchyme condensation cell | 7.69e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.56e-14 | 99 |
integument | 1.64e-12 | 46 |
integumental system | 1.64e-12 | 46 |
skin of body | 1.50e-10 | 41 |
dense mesenchyme tissue | 1.61e-10 | 73 |
somite | 2.48e-10 | 71 |
presomitic mesoderm | 2.48e-10 | 71 |
presumptive segmental plate | 2.48e-10 | 71 |
dermomyotome | 2.48e-10 | 71 |
trunk paraxial mesoderm | 2.48e-10 | 71 |
paraxial mesoderm | 5.68e-10 | 72 |
presumptive paraxial mesoderm | 5.68e-10 | 72 |
epithelial vesicle | 1.04e-09 | 78 |
multilaminar epithelium | 2.12e-09 | 83 |
articulation | 4.80e-07 | 8 |
skeletal joint | 4.80e-07 | 8 |
articular system | 4.80e-07 | 8 |
skeletal muscle tissue | 9.46e-07 | 62 |
striated muscle tissue | 9.46e-07 | 62 |
myotome | 9.46e-07 | 62 |