FFCP PHASE1:Hg19::chr10:121076886..121076894,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:121076886..121076894,+ | |||
|description=CAGE_peak_at_chr10:121076886..121076894,+ | |description=CAGE_peak_at_chr10:121076886..121076894,+ | ||
|id=chr10:121076886..121076894,+ | |id=chr10:121076886..121076894,+ | ||
|ontology_enrichment_celltype=CL:0002202!5.13e-12!9;CL:0002632!5.13e-12!9;CL:0000066!6.30e-12!254;CL:0002368!2.14e-10!13;CL:0000223!4.32e-10!59;CL:0002076!9.93e-10!43;CL:0000068!7.55e-08!3;CL:0000069!7.55e-08!3;CL:0000307!7.55e-08!3;CL:0000377!7.55e-08!3 | |ontology_enrichment_celltype=CL:0002202!5.13e-12!9;CL:0002632!5.13e-12!9;CL:0000066!6.30e-12!254;CL:0002368!2.14e-10!13;CL:0000223!4.32e-10!59;CL:0002076!9.93e-10!43;CL:0000068!7.55e-08!3;CL:0000069!7.55e-08!3;CL:0000307!7.55e-08!3;CL:0000377!7.55e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000307;4.64e-20;3!CL:1001319;1.78e-15;1!CL:1000600;1.78e-15;1!CL:0002202;2.64e-07;9!CL:0002632;2.64e-07;9 | |ontology_enrichment_celltype_v019=CL:0000307;4.64e-20;3!CL:1001319;1.78e-15;1!CL:1000600;1.78e-15;1!CL:0002202;2.64e-07;9!CL:0002632;2.64e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.32e-20,3;CL:0000069,3.32e-20,3;CL:0000307,3.32e-20,3;CL:0000377,3.32e-20,3;CL:1001319,1.78e-15,1;CL:1000600,1.78e-15,1;CL:0002202,2.36e-07,9;CL:0002632,2.36e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;4.64e-20;3 | |ontology_enrichment_development_v019=CL:0000377;4.64e-20;3 | ||
|ontology_enrichment_disease=DOID:305!8.74e-22!106;DOID:0050687!4.88e-21!143;DOID:162!8.41e-21!235;DOID:14566!4.91e-20!239;DOID:1749!1.15e-12!14;DOID:7!9.84e-08!39 | |ontology_enrichment_disease=DOID:305!8.74e-22!106;DOID:0050687!4.88e-21!143;DOID:162!8.41e-21!235;DOID:14566!4.91e-20!239;DOID:1749!1.15e-12!14;DOID:7!9.84e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.74e-25;14!DOID:4231;2.15e-08;2!DOID:4074;2.15e-08;2!DOID:4905;2.15e-08;2!DOID:4929;2.15e-08;2!DOID:3498;2.15e-08;2!DOID:1907;2.15e-08;2 | |ontology_enrichment_disease_v019=DOID:1749;1.74e-25;14!DOID:4231;2.15e-08;2!DOID:4074;2.15e-08;2!DOID:4905;2.15e-08;2!DOID:4929;2.15e-08;2!DOID:3498;2.15e-08;2!DOID:1907;2.15e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.19e-25,14;DOID:305,5.32e-10,106;DOID:0050687,6.79e-09,143;DOID:4074,1.61e-08,2;DOID:4905,1.61e-08,2;DOID:3498,1.61e-08,2;DOID:4231,2.67e-08,2;DOID:1907,2.67e-08,2;DOID:4929,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.68e-11!12;UBERON:0003343!1.64e-09!4;UBERON:0004785!1.64e-09!4;UBERON:0003729!1.35e-07!5;UBERON:0007196!2.71e-07!14;UBERON:0001558!2.71e-07!14 | |ontology_enrichment_uberon=UBERON:0000344!4.68e-11!12;UBERON:0003343!1.64e-09!4;UBERON:0004785!1.64e-09!4;UBERON:0003729!1.35e-07!5;UBERON:0007196!2.71e-07!14;UBERON:0001558!2.71e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.78e-15;1!UBERON:0007195;1.78e-15;1!UBERON:0004913;1.78e-15;1!UBERON:0003703;1.78e-15;1!UBERON:0001256;1.78e-15;1!UBERON:0001259;1.78e-15;1!UBERON:0001174;1.78e-15;1!UBERON:0004914;1.78e-15;1!UBERON:0003126;3.80e-09;7!UBERON:0001005;3.80e-09;7!UBERON:0001255;2.15e-08;2!UBERON:0001556;2.15e-08;2!UBERON:0002075;1.16e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0004645;1.78e-15;1!UBERON:0007195;1.78e-15;1!UBERON:0004913;1.78e-15;1!UBERON:0003703;1.78e-15;1!UBERON:0001256;1.78e-15;1!UBERON:0001259;1.78e-15;1!UBERON:0001174;1.78e-15;1!UBERON:0004914;1.78e-15;1!UBERON:0003126;3.80e-09;7!UBERON:0001005;3.80e-09;7!UBERON:0001255;2.15e-08;2!UBERON:0001556;2.15e-08;2!UBERON:0002075;1.16e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.78e-15,1;UBERON:0001256,1.78e-15,1;UBERON:0001259,1.78e-15,1;UBERON:0007195,3.17e-15,1;UBERON:0004913,3.66e-15,1;UBERON:0003703,3.66e-15,1;UBERON:0001174,3.66e-15,1;UBERON:0004914,3.66e-15,1;UBERON:0003126,3.30e-09,7;UBERON:0001005,3.30e-09,7;UBERON:0001255,2.15e-08,2;UBERON:0001556,2.15e-08,2;UBERON:0002075,1.09e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.718946809178615,0,0,0,0,1.11136990144637,0,0,0,0,0,0,2.04828206913899,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0.210998064528027,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0.150323419414493,0,0,0,0,1.19472429772959,0,0,0,0,0.435296032902013,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0.274083849293502,0.397429223405979,0,0,0.240476460754601,0,0,0.144090417154106,0,0,0,0,1.17847017308398,0.543616824294456,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.670869375198532,0,0,0.316801009558219,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.874862855734746,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0.845248493434508,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,3.53909170043221,0.183428598521679,0.693153996902029,0,0,0,0,0,0,0,0.163771917510097,1.03499260351932,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.327796715891087,0.253397002022874,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,1.22104902916462,0,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.718946809178615,0,0,0,0,1.11136990144637,0,0,0,0,0,0,2.04828206913899,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0.210998064528027,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0.150323419414493,0,0,0,0,1.19472429772959,0,0,0,0,0.435296032902013,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0.274083849293502,0.397429223405979,0,0,0.240476460754601,0,0,0.144090417154106,0,0,0,0,1.17847017308398,0.543616824294456,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.670869375198532,0,0,0.316801009558219,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.874862855734746,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0.845248493434508,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,3.53909170043221,0.183428598521679,0.693153996902029,0,0,0,0,0,0,0,0.163771917510097,1.03499260351932,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.327796715891087,0.253397002022874,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,1.22104902916462,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr10:121076886..121076894,+ | |short_description=p@chr10:121076886..121076894,+ | ||
}} | }} |
Latest revision as of 10:59, 23 July 2015
Short description: | p@chr10:121076886..121076894, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:121076886..121076894, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.32e-20 | 3 |
branched duct epithelial cell | 3.32e-20 | 3 |
tracheal epithelial cell | 3.32e-20 | 3 |
tracheoblast | 3.32e-20 | 3 |
bladder cell | 1.78e-15 | 1 |
lower urinary tract cell | 1.78e-15 | 1 |
epithelial cell of tracheobronchial tree | 2.36e-07 | 9 |
epithelial cell of lower respiratory tract | 2.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.78e-15 | 1 |
wall of urinary bladder | 1.78e-15 | 1 |
mucosa of urinary bladder | 1.78e-15 | 1 |
stroma of bone marrow | 3.17e-15 | 1 |
hepatopancreatic ampulla | 3.66e-15 | 1 |
extrahepatic bile duct | 3.66e-15 | 1 |
common bile duct | 3.66e-15 | 1 |
duodenal papilla | 3.66e-15 | 1 |
trachea | 3.30e-09 | 7 |
respiratory airway | 3.30e-09 | 7 |
urinary bladder | 2.15e-08 | 2 |
lower urinary tract | 2.15e-08 | 2 |
viscus | 1.09e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.19e-25 | 14 |
carcinoma | 5.32e-10 | 106 |
cell type cancer | 6.79e-09 | 143 |
pancreas adenocarcinoma | 1.61e-08 | 2 |
pancreatic carcinoma | 1.61e-08 | 2 |
pancreatic ductal adenocarcinoma | 1.61e-08 | 2 |
histiocytoma | 2.67e-08 | 2 |
malignant fibroxanthoma | 2.67e-08 | 2 |
tubular adenocarcinoma | 3.08e-08 | 2 |