FFCP PHASE1:Hg19::chr1:167487035..167487059,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:167487035..167487059,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_at_chr1:167487035..167487059,+ | |description=CAGE_peak_at_chr1:167487035..167487059,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!1.37e-46!25;CL:0000827!1.37e-46!25;CL:0000791!9.75e-38!18;CL:0000789!9.75e-38!18;CL:0002420!9.75e-38!18;CL:0002419!9.75e-38!18;CL:0000790!9.75e-38!18;CL:0000838!3.30e-27!52;CL:0000542!1.42e-26!53;CL:0000051!1.42e-26!53;CL:0000624!3.72e-20!6;CL:0000738!2.75e-19!140;CL:0000625!7.54e-18!11;CL:0002087!2.95e-15!119;CL:0000037!4.54e-14!172;CL:0000566!4.54e-14!172;CL:0000988!7.99e-13!182;CL:0002031!6.91e-12!124;CL:0002032!7.97e-12!165;CL:0000837!7.97e-12!165;CL:0000623!1.68e-11!3;CL:0000825!1.68e-11!3;CL:0000767!4.30e-11!3;CL:0000898!1.11e-10!3;CL:0000842!2.12e-10!3;CL:0000094!2.62e-10!8;CL:0000224!6.78e-08!4;CL:0000815!1.17e-07!2;CL:0000792!1.17e-07!2;CL:0002677!1.17e-07!2;CL:0000081!2.19e-07!11;CL:0000893!3.81e-07!2;CL:0002489!3.81e-07!2;CL:0000809!3.81e-07!2;CL:0000808!3.81e-07!2;CL:0000894!3.81e-07!2;CL:0000806!3.81e-07!2;CL:0000807!3.81e-07!2;CL:0000805!3.81e-07!2;CL:0002425!3.81e-07!2 | |ontology_enrichment_celltype=CL:0000084!1.37e-46!25;CL:0000827!1.37e-46!25;CL:0000791!9.75e-38!18;CL:0000789!9.75e-38!18;CL:0002420!9.75e-38!18;CL:0002419!9.75e-38!18;CL:0000790!9.75e-38!18;CL:0000838!3.30e-27!52;CL:0000542!1.42e-26!53;CL:0000051!1.42e-26!53;CL:0000624!3.72e-20!6;CL:0000738!2.75e-19!140;CL:0000625!7.54e-18!11;CL:0002087!2.95e-15!119;CL:0000037!4.54e-14!172;CL:0000566!4.54e-14!172;CL:0000988!7.99e-13!182;CL:0002031!6.91e-12!124;CL:0002032!7.97e-12!165;CL:0000837!7.97e-12!165;CL:0000623!1.68e-11!3;CL:0000825!1.68e-11!3;CL:0000767!4.30e-11!3;CL:0000898!1.11e-10!3;CL:0000842!2.12e-10!3;CL:0000094!2.62e-10!8;CL:0000224!6.78e-08!4;CL:0000815!1.17e-07!2;CL:0000792!1.17e-07!2;CL:0002677!1.17e-07!2;CL:0000081!2.19e-07!11;CL:0000893!3.81e-07!2;CL:0002489!3.81e-07!2;CL:0000809!3.81e-07!2;CL:0000808!3.81e-07!2;CL:0000894!3.81e-07!2;CL:0000806!3.81e-07!2;CL:0000807!3.81e-07!2;CL:0000805!3.81e-07!2;CL:0002425!3.81e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.99e-34;6!CL:0000084;9.03e-32;25!CL:0000791;8.24e-29;18!CL:0000789;8.24e-29;18!CL:0002419;8.24e-29;18!CL:0000623;8.03e-27;3!CL:0000767;9.94e-26;3!CL:0000542;2.58e-14;53!CL:0000898;7.35e-12;3!CL:0000094;5.17e-10;8!CL:0000895;1.61e-09;1!CL:0000625;1.38e-07;11!CL:0000081;2.06e-07;11 | |ontology_enrichment_celltype_v019=CL:0000624;1.99e-34;6!CL:0000084;9.03e-32;25!CL:0000791;8.24e-29;18!CL:0000789;8.24e-29;18!CL:0002419;8.24e-29;18!CL:0000623;8.03e-27;3!CL:0000767;9.94e-26;3!CL:0000542;2.58e-14;53!CL:0000898;7.35e-12;3!CL:0000094;5.17e-10;8!CL:0000895;1.61e-09;1!CL:0000625;1.38e-07;11!CL:0000081;2.06e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.41e-34,6;CL:0000084,9.21e-32,25;CL:0000827,9.21e-32,25;CL:0000791,6.74e-29,18;CL:0000789,6.74e-29,18;CL:0002420,6.74e-29,18;CL:0002419,6.74e-29,18;CL:0000790,6.74e-29,18;CL:0000623,8.05e-27,3;CL:0000825,8.05e-27,3;CL:0000767,8.78e-26,3;CL:0000838,4.16e-25,52;CL:0000542,1.36e-24,53;CL:0000051,1.36e-24,53;CL:0000738,6.76e-19,136;CL:0002087,1.05e-15,115;CL:0000037,1.06e-14,168;CL:0000988,8.59e-14,177;CL:0002032,1.09e-13,161;CL:0000837,1.09e-13,161;CL:0002031,5.63e-13,120;CL:0000898,8.22e-12,3;CL:0000094,4.94e-10,8;CL:0000810,1.91e-09,1;CL:0000895,1.91e-09,1;CL:0002436,1.91e-09,1;CL:0002427,1.91e-09,1;CL:0002428,1.91e-09,1;CL:0002429,1.91e-09,1;CL:0002433,1.91e-09,1;CL:0002431,1.91e-09,1;CL:0002432,1.91e-09,1;CL:0000625,1.37e-07,11;CL:0000081,2.00e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.24e-29;18!CL:0000051;2.58e-14;53!CL:0002427;1.61e-09;1 | |ontology_enrichment_development_v019=CL:0000790;8.24e-29;18!CL:0000051;2.58e-14;53!CL:0002427;1.61e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.61e-09;1!DOID:0060061;1.61e-09;1!DOID:8691;1.61e-09;1 | |ontology_enrichment_disease_v019=DOID:0060060;1.61e-09;1!DOID:0060061;1.61e-09;1!DOID:8691;1.61e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.76e-09,1;DOID:0060061,1.76e-09,1;DOID:8691,1.76e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.92e-07!4;UBERON:0005058!1.92e-07!4;UBERON:0009113!1.92e-07!4;UBERON:0003295!1.92e-07!4;UBERON:0005562!1.92e-07!4 | |ontology_enrichment_uberon=UBERON:0002370!1.92e-07!4;UBERON:0005058!1.92e-07!4;UBERON:0009113!1.92e-07!4;UBERON:0003295!1.92e-07!4;UBERON:0005562!1.92e-07!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,2.30297638858328,1.70297735647684,0,0,0,0,0,0,0.553995408531877,1.60435557976113,1.95309783644267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,2.360517241366,1.96505381374582,5.34563897398724,0.334372990781356,0.977766799900771,0.946895611469467,1.94826728407911,0.334231370655521,1.47302953737419,1.10766947291811,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,0.226618685395132,1.14966148080576,2.06176467289578,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0.821127996921047,5.44338206706778,5.08136371988664,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,10.6396610509041,7.97822026980214,11.0375011200584,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.74709290462411,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.890894042497916,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,2.30297638858328,1.70297735647684,0,0,0,0,0,0,0.553995408531877,1.60435557976113,1.95309783644267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,2.360517241366,1.96505381374582,5.34563897398724,0.334372990781356,0.977766799900771,0.946895611469467,1.94826728407911,0.334231370655521,1.47302953737419,1.10766947291811,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,0.226618685395132,1.14966148080576,2.06176467289578,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0.821127996921047,5.44338206706778,5.08136371988664,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,10.6396610509041,7.97822026980214,11.0375011200584,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.74709290462411,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.890894042497916,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:167487035..167487059,+ | |short_description=p@chr1:167487035..167487059,+ | ||
}} | }} |
Latest revision as of 00:01, 28 July 2015
Short description: | p@chr1:167487035..167487059, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:167487035..167487059, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.76e-09 | 1 |
cutaneous T cell lymphoma | 1.76e-09 | 1 |
mycosis fungoides | 1.76e-09 | 1 |