FFCP PHASE1:Hg19::chr1:35656352..35656383,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:35656352..35656383,-
|short_description=p7@SFPQ
|description=CAGE_peak_7_at_SFPQ_5end
|association_with_transcript=-158bp_to_uc001byr.2_5end
|EntrezGene=6...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6421 | |EntrezGene=6421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10774 | |HGNC=10774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-158bp_to_uc001byr.2_5end | |||
|cluster_id=chr1:35656352..35656383,- | |||
|description=CAGE_peak_7_at_SFPQ_5end | |||
|id=chr1:35656352..35656383,- | |||
|ontology_enrichment_celltype=CL:0000860!2.11e-11!45;CL:0002057!8.43e-11!42;CL:0002087!1.35e-07!119;CL:0002032!3.63e-07!165;CL:0000837!3.63e-07!165;CL:0002194!5.71e-07!63;CL:0000576!5.71e-07!63;CL:0000040!5.71e-07!63;CL:0000559!5.71e-07!63;CL:0000037!9.71e-07!172;CL:0000566!9.71e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.96e-11;33!CL:0002057;1.96e-11;33!CL:0000473;4.75e-09;39!CL:0000234;4.75e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-10,42;CL:0002057,1.06e-10,42;CL:0000473,4.28e-10,48;CL:0000234,4.28e-10,48;CL:0002032,9.81e-09,161;CL:0000837,9.81e-09,161;CL:0000037,5.27e-08,168;CL:0002087,2.55e-07,115;CL:0000763,3.29e-07,108;CL:0000049,3.29e-07,108;CL:0002194,5.13e-07,59;CL:0000576,5.13e-07,59;CL:0000040,5.13e-07,59;CL:0000559,5.13e-07,59;CL:0000988,6.32e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-08;42 | |||
|ontology_enrichment_disease=DOID:162!3.91e-10!235;DOID:14566!1.48e-09!239;DOID:2531!1.61e-07!51;DOID:0060083!1.61e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.08e-08,51;DOID:0060083,3.08e-08,51;DOID:162,1.35e-07,235;DOID:1240,2.14e-07,39;DOID:14566,6.34e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,1.22866968250754,1.39560233594486,0.873765488520689,0.527533956456907,0.37129905888014,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0.246242116153576,0.816002764977012,1.25381888591235,0,1.23186982565596,0.502170558379211,0.916960868975415,0.985207073399349,0.944529375764151,0.393364276848904,0.767658796194425,0.77408061658038,0,0.30120591877825,1.10926203050036,1.23947520928483,0.710846162437108,0.880801318004542,1.66198622559563,5.01361118675354,3.90619567288533,0,0.32389366601898,0.257575567634187,1.45398238779565,0.755751887377619,1.21292030593908,3.48643555358527,2.46700732813095,1.54853185447552,3.45230870786581,3.07392847834921,2.83778675866302,2.75796544589295,1.29096936716765,2.70852973188684,2.82363509313907,1.91034305040492,1.34834090667051,3.06083892370903,0.962787081228281,1.27867425159808,2.30895910130701,2.99195486432448,2.55734850319616,8.12585868160035,3.40431134814684,0.622822248995575,3.76872997885115,6.77927793946262,1.08594422352558,5.44859552370032,0.736555271975129,2.53169909952708,0.845021145247767,0.425208599930087,0.628975936525128,0.561643155732475,1.05123824989054,0.48217676009124,0.855038231223746,0.59675003159727,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0,3.41527781465669,2.93618594685469,3.05818582500183,3.96513985737078,0,0.526768169550154,0.983548850569165,7.07419372948497,4.72883447698871,0.334372990781356,0.32592226663359,0.946895611469467,0,0.334231370655521,0,0.221533894583621,0,0.640456598628376,0.650296737799391,0.986627427622057,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.339928028092699,0.383220493601921,0.68725489096526,1.26509846009751,0,0,0,0.150575119077773,0.255973222308837,0,0,0,1.41124720257313,5.88368430723716,2.89648807765598,12.1903433156981,0,0.12786256184353,0,0,0.579386075843295,0.795285947051099,0.486634870302636,1.03988298880475,1.33037638477538,1.40535657109002,0.392937226493138,0.728590576585084,0.741568885568859,0.649094787309367,0,0.531831842075461,1.19245312152671,0,0.371457501329565,0,0,0.694281003215189,1.13061588384802,1.67799774483962,1.6507082516404,0.835979866147242,0.258416759169329,0,0,0.402829317109147,0.760272105718513,1.22031028774085,0.735326160691737,0.81014194788176,0.17859945656816,1.12264686313085,0.225222960966644,0,0,1.46561395144326,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0,0.286836620748814,1.06400514659507,0.560677600142307,0,1.48000529050296,0,0.134710672069688,0.653847612453835,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,1.64393548606981,0.469737994575059,0.971237666208789,0.561803226808994,0.408308342509787,1.84251475967652,0.103325781175765,0,1.23633464639278,0,0.718618141816238,0.673344455816265,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0.680593098960126,1.97328599257748,0.213557388818567,1.90738711043606,1.20036438433761,0.412210116953756,1.03056216018252,0.744467425326359,1.5189869901714,0.194874010322397,1.00973509697646,0.460249493211497,0,1.77504796258307,0.302256294682921,1.3564847384839,0.386521706326594,1.09098448236334,0.286804595389004,1.82960559194393,1.98794652482228,1.97529702878181,2.38420426535352,1.26160425437814,2.91981887260664,0,1.28648187638577,0,0.928735856063958,1.44375896333917,2.24782920075703,1.51726221070292,2.41011029883482,2.09558548191549,1.30727666455444,1.18635309555548,1.8876383142423,1.37355025587742,1.92373578473195,0.738155454624648,0,0.8231480226628,0,1.26755034821831,0.982827216677626,1.18157981336281,2.6487785964879,0.245976877086227,1.02940686179115,0.219500570817251,0,1.91005047582099,0.555530670951178,0.325808305310325,1.03993478527958,1.44331342025273,0.579652024875384,0.234817388471643,0.144366447761074,2.31492756288305,2.47330397904978,0,0.858486162094873,0.492434012174795,0.468008530278475,0.148631162288728,0,0.335964256397719,0.850650583454319,0.806026704325635,0.290633938513962,0.766765358330422,0,0.704387472105808,0,0,0.12624243342638,0.444485260045183,0.381988425558278,0,0,0.616964956219941,1.20137223137567,0.285826432630578,0.448524337381443,0.43596006883328,0.95339771567235,0.258543431515556,0,1.690605505112,0.797814349754612,0,1.02882949704857,2.83698264046557,0.799266537048298,0.857867961948885,0,0,0.65147236858747,0,0,0,0,1.49959486773086,3.64871341923571,0,6.32501818449095,1.4377491329495,0,0,0.144781306667579,2.05476322550383,0.358121926479791,1.34502172792233,1.37921532141349,3.01878604803324,4.10697716095195,0,0,6.18631050222156,0.670065061337395,5.10351001322531,0,0,0,1.10422342547226,2.00068208423871,0.542530047399471,0.415941723061614,0.892144943985809,0.157702415033935,0.468565659970853,0,0,0,0.664225598535437,1.10621501125022,0.60818530127658,0.195801157462741,0.343143423810856,0.206768026122887,0.431428401637234,0.74709290462411,0.303127571446259,0,0.60478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| ||
|short_description=p7@SFPQ | |||
}} | }} |
Latest revision as of 18:26, 17 September 2015
Short description: | p7@SFPQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SFPQ_5end |
Coexpression cluster: | NA |
Association with transcript: | -158bp_to_uc001byr.2_5end |
EntrezGene: | SFPQ |
HGNC: | 10774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-10 | 42 |
defensive cell | 4.28e-10 | 48 |
phagocyte | 4.28e-10 | 48 |
hematopoietic oligopotent progenitor cell | 9.81e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.81e-09 | 161 |
hematopoietic stem cell | 5.27e-08 | 168 |
nongranular leukocyte | 2.55e-07 | 115 |
myeloid cell | 3.29e-07 | 108 |
common myeloid progenitor | 3.29e-07 | 108 |
monopoietic cell | 5.13e-07 | 59 |
monocyte | 5.13e-07 | 59 |
monoblast | 5.13e-07 | 59 |
promonocyte | 5.13e-07 | 59 |
hematopoietic cell | 6.32e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.08e-08 | 51 |
immune system cancer | 3.08e-08 | 51 |
cancer | 1.35e-07 | 235 |
leukemia | 2.14e-07 | 39 |
disease of cellular proliferation | 6.34e-07 | 239 |