FFCP PHASE1:Hg19::chrX:96565590..96565618,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:96565590..96565618,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chrX:96565590..96565618,+ | |description=CAGE_peak_at_chrX:96565590..96565618,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!2.17e-24!19;CL:0002322!1.24e-16!5;CL:0000039!3.61e-16!7;CL:0000586!3.61e-16!7;CL:0000066!5.48e-14!254;CL:0000076!1.49e-08!62;CL:0000147!2.76e-07!14;CL:0000213!3.10e-07!57;CL:0000215!3.10e-07!57;CL:0002097!3.59e-07!2 | |ontology_enrichment_celltype=CL:0000077!2.17e-24!19;CL:0002322!1.24e-16!5;CL:0000039!3.61e-16!7;CL:0000586!3.61e-16!7;CL:0000066!5.48e-14!254;CL:0000076!1.49e-08!62;CL:0000147!2.76e-07!14;CL:0000213!3.10e-07!57;CL:0000215!3.10e-07!57;CL:0002097!3.59e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.10e-35;5!CL:0000077;1.60e-21;19!CL:0000039;9.49e-17;7!CL:0000586;9.49e-17;7!CL:0002321;1.46e-11;15!CL:0000540;2.00e-11;6!CL:0000404;2.00e-11;6!CL:0000148;8.63e-07;10 | |ontology_enrichment_celltype_v019=CL:0002322;6.10e-35;5!CL:0000077;1.60e-21;19!CL:0000039;9.49e-17;7!CL:0000586;9.49e-17;7!CL:0002321;1.46e-11;15!CL:0000540;2.00e-11;6!CL:0000404;2.00e-11;6!CL:0000148;8.63e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.32e-35,5;CL:0000077,1.52e-21,19;CL:0000039,9.31e-17,7;CL:0000586,9.31e-17,7;CL:0000540,2.00e-11,6;CL:0000031,2.00e-11,6;CL:0000404,2.00e-11,6;CL:0000047,1.10e-08,8;CL:0000066,5.73e-08,253;CL:0000148,8.72e-07,10;CL:0000541,8.72e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.59e-18;10!UBERON:0005564;6.59e-18;10!CL:0000031;2.00e-11;6 | |ontology_enrichment_development_v019=UBERON:0009117;6.59e-18;10!UBERON:0005564;6.59e-18;10!CL:0000031;2.00e-11;6 | ||
|ontology_enrichment_disease=DOID:0050687!2.92e-11!143;DOID:3095!2.72e-10!22;DOID:2994!2.72e-10!22;DOID:305!2.28e-09!106;DOID:162!5.79e-09!235;DOID:14566!1.35e-08!239 | |ontology_enrichment_disease=DOID:0050687!2.92e-11!143;DOID:3095!2.72e-10!22;DOID:2994!2.72e-10!22;DOID:305!2.28e-09!106;DOID:162!5.79e-09!235;DOID:14566!1.35e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.71e-15;22!DOID:2994;4.71e-15;22!DOID:178;5.82e-08;1!DOID:326;5.82e-08;1!DOID:3978;5.82e-08;1!DOID:3394;5.82e-08;1!DOID:5844;5.82e-08;1 | |ontology_enrichment_disease_v019=DOID:3095;4.71e-15;22!DOID:2994;4.71e-15;22!DOID:178;5.82e-08;1!DOID:326;5.82e-08;1!DOID:3978;5.82e-08;1!DOID:3394;5.82e-08;1!DOID:5844;5.82e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,4.87e-15,22;DOID:2994,4.87e-15,22;DOID:178,6.24e-08,1;DOID:326,6.24e-08,1;DOID:3978,6.24e-08,1;DOID:3394,6.24e-08,1;DOID:5844,6.24e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.67e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!5.67e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.12e-14;8!UBERON:0003135;1.03e-10;11!UBERON:0000991;2.05e-08;21!UBERON:0000922;7.72e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.12e-14;8!UBERON:0003135;1.03e-10;11!UBERON:0000991;2.05e-08;21!UBERON:0000922;7.72e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.10e-14,8;UBERON:0003135,1.02e-10,11;UBERON:0000991,2.04e-08,21;UBERON:0009196,2.04e-08,21;UBERON:0009117,2.04e-08,21;UBERON:0005564,2.04e-08,21;UBERON:0004176,5.05e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.2372541362508,79.3853312245697,47.4071286907635,38.6655735207332,50.4641701751257,78.4701322013034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8605408508243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,8.02224937621568,0,0,0,0,0,0,0,0,0,0,0,6.83062910471503,0,0.694238953340524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,77.0007581147442,164.359626733694,226.830424563935,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,1.71553273099941,2.08795433572169,1.13352962756136,0.231522474323834,0,0.179088841081487,4.94082315457555,1.53498834705095,0.530067437837643,2.89371057406372,1.68942440653073,0,51.4691209179486,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,106.736795410477,128.933374917161,1.14028650910293,146.557948339228,273.363405586668,197.298349301312,50.6429229370598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.2372541362508,79.3853312245697,47.4071286907635,38.6655735207332,50.4641701751257,78.4701322013034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8605408508243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,8.02224937621568,0,0,0,0,0,0,0,0,0,0,0,6.83062910471503,0,0.694238953340524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,77.0007581147442,164.359626733694,226.830424563935,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,1.71553273099941,2.08795433572169,1.13352962756136,0.231522474323834,0,0.179088841081487,4.94082315457555,1.53498834705095,0.530067437837643,2.89371057406372,1.68942440653073,0,51.4691209179486,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,106.736795410477,128.933374917161,1.14028650910293,146.557948339228,273.363405586668,197.298349301312,50.6429229370598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:96565590..96565618,+ | |short_description=p@chrX:96565590..96565618,+ | ||
}} | }} |
Latest revision as of 09:54, 1 August 2015
Short description: | p@chrX:96565590..96565618, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:96565590..96565618, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.32e-35 | 5 |
mesothelial cell | 1.52e-21 | 19 |
germ line cell | 9.31e-17 | 7 |
germ cell | 9.31e-17 | 7 |
neuron | 2.00e-11 | 6 |
neuroblast | 2.00e-11 | 6 |
electrically signaling cell | 2.00e-11 | 6 |
neuronal stem cell | 1.10e-08 | 8 |
epithelial cell | 5.73e-08 | 253 |
melanocyte | 8.72e-07 | 10 |
melanoblast | 8.72e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 1.10e-14 | 8 |
male reproductive organ | 1.02e-10 | 11 |
gonad | 2.04e-08 | 21 |
indifferent external genitalia | 2.04e-08 | 21 |
indifferent gonad | 2.04e-08 | 21 |
gonad primordium | 2.04e-08 | 21 |
external genitalia | 5.05e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.87e-15 | 22 |
germ cell cancer | 4.87e-15 | 22 |
vascular disease | 6.24e-08 | 1 |
ischemia | 6.24e-08 | 1 |
extrinsic cardiomyopathy | 6.24e-08 | 1 |
myocardial ischemia | 6.24e-08 | 1 |
myocardial infarction | 6.24e-08 | 1 |