FFCP PHASE1:Hg19::chr1:43824669..43824680,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:43824669..43824680,+
|short_description=p3@CDC20
|description=CAGE_peak_3_at_CDC20_5end
|association_with_transcript=-3bp_to_ENST00000372462_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=991 | |EntrezGene=991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1723 | |HGNC=1723 | ||
|TSSclassifier=strong | |||
|UniProt=Q12834 | |UniProt=Q12834 | ||
|association_with_transcript=-3bp_to_ENST00000372462_5end | |||
|cluster_id=chr1:43824669..43824680,+ | |||
|coexpression_cluster_id=C2586 | |||
|description=CAGE_peak_3_at_CDC20_5end | |||
|id=chr1:43824669..43824680,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.37e-24!254;CL:0000548!6.46e-18!679;CL:0000004!6.46e-18!679;CL:0000255!6.46e-18!679;CL:0000012!1.44e-17!682;CL:0002321!7.07e-15!248;CL:0000220!8.49e-15!246;CL:0000076!7.10e-10!62;CL:0000003!7.94e-09!722;CL:0000055!2.02e-08!180;CL:0000063!3.94e-08!578;CL:0000222!2.78e-07!119;CL:0000144!5.05e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.49e-19,253;CL:0002321,1.82e-11,250;CL:0000076,4.59e-09,63;CL:0000213,2.07e-07,58;CL:0000215,2.07e-07,58;CL:0000222,5.57e-07,121;CL:0002078,7.78e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.84e-29!235;DOID:14566!3.86e-28!239;DOID:0050687!3.53e-17!143;DOID:305!2.13e-13!106;DOID:0050686!9.84e-13!137;DOID:2531!5.97e-08!51;DOID:0060083!5.97e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.15e-24,235;DOID:14566,5.00e-22,239;DOID:0050687,1.27e-13,143;DOID:305,7.67e-11,106;DOID:0050686,4.85e-10,137;DOID:2531,1.12e-07,51;DOID:0060083,1.12e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000487!6.33e-08!22;UBERON:0003104!1.06e-07!238;UBERON:0009142!1.06e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;4.44e-08;22!UBERON:0000490;4.18e-07;33!UBERON:0002113;4.19e-07;24!UBERON:0011143;4.19e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,2.74e-08,22;UBERON:0000072,8.37e-07,47;UBERON:0006914,9.02e-07,25 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,10.3208253330634,21.6318362071453,0.873765488520689,3.16520373874144,0.247532705920093,0,0,1.20538905604795,0,0,6.77165819422333,6.12002073732759,2.19418305034661,1.43117993565528,5.88560027813402,5.90050406095573,1.75750833220288,2.8735206307481,2.91229890860613,0,0,0.154816123316076,11.9524759182261,6.92773613189975,5.9160641626686,3.02122082263176,1.13735385989937,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,2.37045676297569,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.768547918354051,0.520237390239513,0.493313713811028,0.829050053357545,0.289803085735052,0,0,0,0.906474741580529,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.30152611318355,13.373248638229,1.50401373190767,0.869079113764942,2.3858578411533,0,2.83604451492204,1.55210578223795,1.84453049955565,0.589405839739707,4.37154345951051,9.26961106961073,0,0,0,0,0,0,3.37896092523399,6.02164216574287,4.51282652089873,1.69592382577203,3.35599548967925,3.85165258716094,7.10582886225156,0.516833518338658,0,0,3.22263453687318,0.760272105718513,1.46437234528902,6.61793544622564,2.43042584364528,4.01848777278359,3.81699933464489,5.96840846561608,1.53316637465883,4.74632829784064,4.946447086121,0,0,3.48875241714027,0.496971951695318,3.03913227994991,0,2.58152958673932,3.90135220418193,1.12135520028461,1.06748995729705,0.98667019366864,2.8008993185979,2.2900814251847,4.25000948094993,0.908144565869588,0,5.85803579584492,0,5.13424639390004,0.298897361103602,3.28816596202542,3.23745888736263,2.94946694074722,1.63323337003915,4.17636678860011,0.413303124703062,0,0.741800787835671,2.73048408581408,0.718618141816238,2.86171393721913,3.00284447692714,3.04770527032601,3.07284334616587,1.83892677479412,0.300476117813194,3.28953331164061,2.51145489964407,0.640672166455702,0.211931901159562,4.20127534518163,1.75189299705346,1.8034837803194,0.18611685633159,1.85653965465393,2.33848812386877,1.7670364197088,0.184099797284599,0.161646056818812,1.42003837006646,4.53384442024381,5.08681776931463,1.54608682530637,1.90922284413584,2.29443676311203,1.58565817968474,1.19276791489337,2.78865462886844,1.14027160516907,2.27088765788066,4.74470566798579,1.56449532329816,1.92972281457866,9.66944449467364,0,0,4.61396520155391,3.37169380156203,4.09718750801919,3.19852520923942,2.61455332910887,3.32178866755535,4.85392709376592,4.12065076763227,3.46272441251751,2.21446636387394,8.41450642820675,4.115740113314,1.47008711385542,0,0,0,1.32438929824395,0.860919069801795,3.08822058537346,0.878002283269004,3.37205259772859,4.52380375852339,1.85176890317059,3.58389135841357,5.19967392639789,1.44331342025273,1.39116485970092,0.469634776943287,0.577465791044295,2.31492756288305,0.570762456703795,3.95102198979638,1.71697232418975,0,0.234004265139238,2.37809859661965,1.87467667973554,0.335964256397719,1.27597587518148,3.31366534000539,6.39394664730716,7.66765358330422,3.4486426652716,0.792435906119034,0,0,0,0.571481048629521,3.05590740446622,2.34434894420094,1.71072446022705,0.308482478109971,3.00343057843917,0.571652865261156,4.48524337381443,4.79556075716608,2.56684000373325,0.129271715757778,0,3.381211010224,0,1.04007436911366,7.20180647933998,2.83698264046557,9.05835408654738,0.714889968290738,0.542621605391443,9.05564370458846,4.88604276440603,0,9.50342247520115,0,0,0.099972991182057,0,0,0,0.239624855491583,0,2.85273810081437,1.88215698667853,0.821905290201534,5.19276793395697,1.68127715990291,0,0,0,0.254094624222463,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.12269149171914,0,1.08506009479894,0,0.713715955188647,0.946214490203608,0.585707074963566,0,0,0,3.32112799267718,4.05612170791747,1.39013783148933,0.195801157462741,0.343143423810856,0.206768026122887,0,0,0.909382714338778,4.99306318531491,4.23346410661552,0,0,0.280660094433074,0,0,0,0,6.16838775210622,1.59805552781814,2.79232330446951,2.07701771673448,3.1376802184189,1.32945394550784,0.40101294060657,0,5.1666501674073,4.73437036817464,0.393373244878272,3.15839729035188,0.616122696835318,14.9026456143602,4.38417673959782,1.37217117560738,9.09867072567173,3.40187410553031,4.31831832204279,1.54227252690289,4.33514300070165,2.00675909541941,4.84264918785573,3.3243040357149,6.71624264166535,5.7007567927943,3.92153176537351,4.10320200186223,2.62411716559765,0,0,0.824125183365091,0.577566499444116,2.87132768998086,0.650060246036521,4.82051789532479,0.870036464629098,3.69716681075147,5.2191249406884,3.72158745708233,1.50388342815583,1.88521702088497,2.38634556765083,0.623224249527161,0.495854746082934,0.768760269460425,2.67986696238627,0.10115778085555,0,0,0.6970372701606,1.23213432070436,1.59691809095107,1.73986598415015,0.37064843820784,1.5743737541619,1.48863347743867,0.632758849437452,0,3.83846686967001,0,1.90921948755562,3.92474320099615,0.359744915166629,0.823611089208164,2.94531005864216,2.426189778879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| ||
|short_description=p3@CDC20 | |||
}} | }} |
Latest revision as of 04:22, 18 September 2015
Short description: | p3@CDC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDC20_5end |
Coexpression cluster: | C2586_Alveolar_acute_Renal_Mesenchymal_Bronchial_Trabecular_Corneal |
Association with transcript: | -3bp_to_ENST00000372462_5end |
EntrezGene: | CDC20 |
HGNC: | 1723 |
UniProt: | Q12834 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.49e-19 | 253 |
embryonic cell | 1.82e-11 | 250 |
squamous epithelial cell | 4.59e-09 | 63 |
lining cell | 2.07e-07 | 58 |
barrier cell | 2.07e-07 | 58 |
mesodermal cell | 5.57e-07 | 121 |
meso-epithelial cell | 7.78e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 2.74e-08 | 22 |
segment of respiratory tract | 8.37e-07 | 47 |
squamous epithelium | 9.02e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.15e-24 | 235 |
disease of cellular proliferation | 5.00e-22 | 239 |
cell type cancer | 1.27e-13 | 143 |
carcinoma | 7.67e-11 | 106 |
organ system cancer | 4.85e-10 | 137 |
hematologic cancer | 1.12e-07 | 51 |
immune system cancer | 1.12e-07 | 51 |