FFCP PHASE1:Hg19::chr1:46073987..46074014,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:46073987..46074014,-
|short_description=p@chr1:46073987..46074014,-
|description=CAGE_peak_at_chr1:46073987..46074014,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:46073987..46074014,- | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr1:46073987..46074014,- | |||
|id=chr1:46073987..46074014,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.06e-35;5!CL:0000540;9.15e-18;6!CL:0000404;9.15e-18;6!CL:0002321;5.76e-12;15!CL:0000148;1.42e-10;10!CL:0000147;1.06e-07;14!CL:0002319;6.28e-07;25!CL:0000075;8.85e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.38e-35,5;CL:0000540,9.17e-18,6;CL:0000031,9.17e-18,6;CL:0000404,9.17e-18,6;CL:0000047,1.79e-13,8;CL:0000148,1.24e-10,10;CL:0000541,1.24e-10,10;CL:0000133,2.32e-08,59;CL:0000147,9.68e-08,14;CL:0002319,6.69e-07,25;CL:0000075,8.72e-07,27;CL:0000221,9.01e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;9.15e-18;6 | |||
|ontology_enrichment_disease=DOID:0050687!9.58e-18!143;DOID:162!1.70e-17!235;DOID:14566!6.55e-17!239;DOID:305!2.28e-12!106;DOID:3095!2.19e-08!22;DOID:2994!2.19e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.66e-08;22!DOID:2994;2.66e-08;22!DOID:4468;8.52e-07;2!DOID:3307;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.77e-08,22;DOID:2994,2.77e-08,22;DOID:3307,6.07e-07,2;DOID:4468,6.80e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.85870796139317,1.09499540058307,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0.204154171254893,0.737005903870608,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,1.46368447355514,1.59035721985782,1.2781333715647,0.414644220061482,1.7662459561294,1.45990943630332,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0.431255149719035,0,0,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.232420756919918,0.241718899183244,0,0.184161977871793,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.769350375349168,0,0,0,0.366277859273374,0.247528499761764,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.827019434907183,0.107420244868274,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0.144269212976445,0,0.318852545457645,0.399158742865633,0,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0.80719882876419,0,0,0,0.447352215784832,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0.455173793141999,0.508507300585533,0.709163045303809,0.344743373241465,0.291604613383254,0.694499979733169,0,0,0,0,0,0,0.32681539055697,0.697118721393016,0,0.227884111694002,0.23056390438806,0.269272933229316,0.434589487688032,0.31900115973192,0,0,0,0.470940769185074,0,0,0.392125068635479,0.167821586975843,0.189753732724185,0,1.68798451622422,0.163232808159148,0.424059214301822,0,0,0,0,0,0,0.208843899010911,0,0.802577647298789,0,0.182454789215666,0.19566461893209,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0.51595809741485,0.19351266257817,0.219267951258557,0.492692742319255,0,0,0.225980740780532,0.274083849293502,0.596143835108969,0,0.586654148204409,0,0,0.799238438328521,0.144090417154106,0.343609788497747,0.171594997861965,0,0.124252535565433,0,0.271808412147228,0,0.815985741090574,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.315132729228895,0.247247575143499,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0.136203406111576,4.01882871162548,4.53880140770872,7.89336642255452,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,1.19730191562487,0.164185041498678,0,0.226624183040251,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.276697269872462,0.249960815924213,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0.680117776536817,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0.215649622793364,0.157265941855896,0.218419276384028,0.848662649770126,0.637724760305049,0.619678821295011,0.558644917973244,0,0.23658523500376,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0.707818340086442,0.733714394086716,0.346576998451015,0,0,0,0,0.20170506870352,0,0.785720083444267,0.49131575253029,0,0,0,0,0.0634158101939068,1.09394961803644,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0.115233987555779,0.514464028312255,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.697448552208751,0.173858272302579,0,0.207216164163037,0,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0.22589216407792,0,0.150962843566674,0,0.218559560503957,1.41095188908457,0,0,0.588925401344836,0,0.8453114551668,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.286679166302903,0.315543124386369,0,0,0.5290268405154,0,0,0,1.26166424835079,4.04282616265674,1.0135880080915,0.509944148709909,0.801652215796681,0,0.250707539292375,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0.606351566874658,0,0,0,0,0,0.325613074443898,0.533636729388577,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.85870796139317,1.09499540058307,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0.204154171254893,0.737005903870608,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,1.46368447355514,1.59035721985782,1.2781333715647,0.414644220061482,1.7662459561294,1.45990943630332,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0.431255149719035,0,0,0,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.232420756919918,0.241718899183244,0,0.184161977871793,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.769350375349168,0,0,0,0.366277859273374,0.247528499761764,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.827019434907183,0.107420244868274,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0.144269212976445,0,0.318852545457645,0.399158742865633,0,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0.80719882876419,0,0,0,0.447352215784832,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.222617410045812,0.329607748453519,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0.455173793141999,0.508507300585533,0.709163045303809,0.344743373241465,0.291604613383254,0.694499979733169,0,0,0,0,0,0,0.32681539055697,0.697118721393016,0,0.227884111694002,0.23056390438806,0.269272933229316,0.434589487688032,0.31900115973192,0,0,0,0.470940769185074,0,0,0.392125068635479,0.167821586975843,0.189753732724185,0,1.68798451622422,0.163232808159148,0.424059214301822,0,0,0,0,0,0,0.208843899010911,0,0.802577647298789,0,0.182454789215666,0.19566461893209,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0.51595809741485,0.19351266257817,0.219267951258557,0.492692742319255,0,0,0.225980740780532,0.274083849293502,0.596143835108969,0,0.586654148204409,0,0,0.799238438328521,0.144090417154106,0.343609788497747,0.171594997861965,0,0.124252535565433,0,0.271808412147228,0,0.815985741090574,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.315132729228895,0.247247575143499,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0.136203406111576,4.01882871162548,4.53880140770872,7.89336642255452,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,1.19730191562487,0.164185041498678,0,0.226624183040251,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.276697269872462,0.249960815924213,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0.680117776536817,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0.215649622793364,0.157265941855896,0.218419276384028,0.848662649770126,0.637724760305049,0.619678821295011,0.558644917973244,0,0.23658523500376,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0.707818340086442,0.733714394086716,0.346576998451015,0,0,0,0,0.20170506870352,0,0.785720083444267,0.49131575253029,0,0,0,0,0.0634158101939068,1.09394961803644,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0.115233987555779,0.514464028312255,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.697448552208751,0.173858272302579,0,0.207216164163037,0,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0.22589216407792,0,0.150962843566674,0,0.218559560503957,1.41095188908457,0,0,0.588925401344836,0,0.8453114551668,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.286679166302903,0.315543124386369,0,0,0.5290268405154,0,0,0,1.26166424835079,4.04282616265674,1.0135880080915,0.509944148709909,0.801652215796681,0,0.250707539292375,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0.33639558774184,0,0.606351566874658,0,0,0,0,0,0.325613074443898,0.533636729388577,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:46073987..46074014,- | |||
}} | }} |
Latest revision as of 08:43, 28 July 2015
Short description: | p@chr1:46073987..46074014, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:46073987..46074014, - |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.38e-35 | 5 |
neuron | 9.17e-18 | 6 |
neuroblast | 9.17e-18 | 6 |
electrically signaling cell | 9.17e-18 | 6 |
neuronal stem cell | 1.79e-13 | 8 |
melanocyte | 1.24e-10 | 10 |
melanoblast | 1.24e-10 | 10 |
neurectodermal cell | 2.32e-08 | 59 |
pigment cell | 9.68e-08 | 14 |
neural cell | 6.69e-07 | 25 |
columnar/cuboidal epithelial cell | 8.72e-07 | 27 |
ectodermal cell | 9.01e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.77e-08 | 22 |
germ cell cancer | 2.77e-08 | 22 |
teratoma | 6.07e-07 | 2 |
clear cell adenocarcinoma | 6.80e-07 | 2 |