FFCP PHASE1:Hg19::chr19:49264178..49264182,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49264178..49264182,+ | |||
|description=CAGE_peak_at_chr19:49264178..49264182,+ | |description=CAGE_peak_at_chr19:49264178..49264182,+ | ||
|id=chr19:49264178..49264182,+ | |id=chr19:49264178..49264182,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.49e-09!172;CL:0000566!5.49e-09!172;CL:0000988!3.57e-08!182;CL:0000453!1.43e-07!5;CL:0002032!2.86e-07!165;CL:0000837!2.86e-07!165 | |ontology_enrichment_celltype=CL:0000037!5.49e-09!172;CL:0000566!5.49e-09!172;CL:0000988!3.57e-08!182;CL:0000453!1.43e-07!5;CL:0002032!2.86e-07!165;CL:0000837!2.86e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.80e-18;2!CL:0001016;1.80e-18;2!CL:0000453;3.64e-16;5!CL:0000451;1.29e-12;10!CL:1001319;4.66e-10;1!CL:1000600;4.66e-10;1!CL:0002032;1.68e-09;1!CL:0000817;1.68e-09;1!CL:0000557;1.68e-09;1!CL:0000990;3.27e-09;8!CL:0000840;9.87e-07;5 | |ontology_enrichment_celltype_v019=CL:0001014;1.80e-18;2!CL:0001016;1.80e-18;2!CL:0000453;3.64e-16;5!CL:0000451;1.29e-12;10!CL:1001319;4.66e-10;1!CL:1000600;4.66e-10;1!CL:0002032;1.68e-09;1!CL:0000817;1.68e-09;1!CL:0000557;1.68e-09;1!CL:0000990;3.27e-09;8!CL:0000840;9.87e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.73e-18,2;CL:0001016,1.73e-18,2;CL:0000453,3.47e-16,5;CL:0000451,1.16e-12,10;CL:1001319,4.87e-10,1;CL:1000600,4.87e-10,1;CL:0000990,3.18e-09,8;CL:0000037,3.59e-07,168;CL:0000840,9.74e-07,5;CL:0001029,9.74e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!5.25e-13!239;DOID:162!1.04e-12!235;DOID:2531!4.71e-08!51;DOID:0060083!4.71e-08!51;DOID:0050687!4.85e-08!143;DOID:305!6.56e-08!106;DOID:1749!6.81e-08!14 | |ontology_enrichment_disease=DOID:14566!5.25e-13!239;DOID:162!1.04e-12!235;DOID:2531!4.71e-08!51;DOID:0060083!4.71e-08!51;DOID:0050687!4.85e-08!143;DOID:305!6.56e-08!106;DOID:1749!6.81e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:0060085;7.82e-10;1!DOID:3165;7.82e-10;1!DOID:0060121;7.82e-10;1!DOID:3111;7.82e-10;1!DOID:2438;7.82e-10;1!DOID:4418;7.82e-10;1!DOID:3603;7.82e-10;1!DOID:3112;1.68e-09;1 | |ontology_enrichment_disease_v019=DOID:0060085;7.82e-10;1!DOID:3165;7.82e-10;1!DOID:0060121;7.82e-10;1!DOID:3111;7.82e-10;1!DOID:2438;7.82e-10;1!DOID:4418;7.82e-10;1!DOID:3603;7.82e-10;1!DOID:3112;1.68e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.31e-10,1;DOID:3165,6.31e-10,1;DOID:0060121,6.31e-10,1;DOID:2438,6.31e-10,1;DOID:4418,6.31e-10,1;DOID:3111,8.91e-10,1;DOID:3603,8.91e-10,1;DOID:3112,1.91e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.87e-11;7!UBERON:0001173;1.87e-11;7!UBERON:0004913;4.08e-10;1!UBERON:0003703;4.08e-10;1!UBERON:0001174;4.08e-10;1!UBERON:0004914;4.08e-10;1!UBERON:0004645;4.66e-10;1!UBERON:0001256;4.66e-10;1!UBERON:0001259;4.66e-10;1!UBERON:0002394;1.46e-09;4!UBERON:0003928;1.46e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0002294;1.87e-11;7!UBERON:0001173;1.87e-11;7!UBERON:0004913;4.08e-10;1!UBERON:0003703;4.08e-10;1!UBERON:0001174;4.08e-10;1!UBERON:0004914;4.08e-10;1!UBERON:0004645;4.66e-10;1!UBERON:0001256;4.66e-10;1!UBERON:0001259;4.66e-10;1!UBERON:0002394;1.46e-09;4!UBERON:0003928;1.46e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.09e-10,1;UBERON:0003703,4.09e-10,1;UBERON:0001174,4.09e-10,1;UBERON:0004914,4.09e-10,1;UBERON:0004645,4.87e-10,1;UBERON:0001256,4.87e-10,1;UBERON:0001259,4.87e-10,1;UBERON:0002294,4.81e-09,9;UBERON:0001173,4.81e-09,9;UBERON:0004912,4.81e-09,9 | |||
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| ||
|short_description=p@chr19:49264178..49264182,+ | |short_description=p@chr19:49264178..49264182,+ | ||
}} | }} |
Latest revision as of 15:50, 27 July 2015
Short description: | p@chr19:49264178..49264182, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49264178..49264182, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.73e-18 | 2 |
immature CD1a-positive Langerhans cell | 1.73e-18 | 2 |
Langerhans cell | 3.47e-16 | 5 |
dendritic cell | 1.16e-12 | 10 |
bladder cell | 4.87e-10 | 1 |
lower urinary tract cell | 4.87e-10 | 1 |
conventional dendritic cell | 3.18e-09 | 8 |
hematopoietic stem cell | 3.59e-07 | 168 |
immature conventional dendritic cell | 9.74e-07 | 5 |
common dendritic progenitor | 9.74e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 4.09e-10 | 1 |
extrahepatic bile duct | 4.09e-10 | 1 |
common bile duct | 4.09e-10 | 1 |
duodenal papilla | 4.09e-10 | 1 |
urinary bladder urothelium | 4.87e-10 | 1 |
wall of urinary bladder | 4.87e-10 | 1 |
mucosa of urinary bladder | 4.87e-10 | 1 |
biliary system | 4.81e-09 | 9 |
biliary tree | 4.81e-09 | 9 |
biliary bud | 4.81e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.31e-10 | 1 |
skin benign neoplasm | 6.31e-10 | 1 |
integumentary system benign neoplasm | 6.31e-10 | 1 |
dermis tumor | 6.31e-10 | 1 |
cutaneous fibrous histiocytoma | 6.31e-10 | 1 |
cystadenocarcinoma | 8.91e-10 | 1 |
mucinous cystadenocarcinoma | 8.91e-10 | 1 |
papillary adenocarcinoma | 1.91e-09 | 1 |