FFCP PHASE1:Hg19::chr15:33447055..33447064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33447055..33447064,- | |||
|coexpression_cluster_id=C897 | |coexpression_cluster_id=C897 | ||
|description=CAGE_peak_at_chr15:33447055..33447064,- | |description=CAGE_peak_at_chr15:33447055..33447064,- | ||
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|ontology_enrichment_celltype=CL:0002057!5.67e-11!42;CL:0000148!2.56e-10!10;CL:0000541!2.56e-10!10;CL:0000860!5.36e-10!45;CL:0002194!4.15e-09!63;CL:0000576!4.15e-09!63;CL:0000040!4.15e-09!63;CL:0000559!4.15e-09!63;CL:0002009!1.06e-08!65;CL:0000710!6.93e-08!20;CL:0000839!8.66e-08!70;CL:0000557!1.27e-07!71;CL:0000147!4.09e-07!14;CL:0000766!7.34e-07!76 | |ontology_enrichment_celltype=CL:0002057!5.67e-11!42;CL:0000148!2.56e-10!10;CL:0000541!2.56e-10!10;CL:0000860!5.36e-10!45;CL:0002194!4.15e-09!63;CL:0000576!4.15e-09!63;CL:0000040!4.15e-09!63;CL:0000559!4.15e-09!63;CL:0002009!1.06e-08!65;CL:0000710!6.93e-08!20;CL:0000839!8.66e-08!70;CL:0000557!1.27e-07!71;CL:0000147!4.09e-07!14;CL:0000766!7.34e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.76e-23;10!CL:0000147;1.08e-16;14!CL:0000710;6.62e-12;20!CL:0002567;1.01e-09;3!CL:0000075;5.43e-09;27 | |ontology_enrichment_celltype_v019=CL:0000148;4.76e-23;10!CL:0000147;1.08e-16;14!CL:0000710;6.62e-12;20!CL:0002567;1.01e-09;3!CL:0000075;5.43e-09;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.76e-23,10;CL:0000541,4.76e-23,10;CL:0000147,1.08e-16,14;CL:0000710,6.62e-12,20;CL:0002567,1.01e-09,3;CL:0000333,1.12e-09,41;CL:0000075,5.43e-09,27;CL:0002077,2.89e-07,34;CL:0000133,6.26e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.30e-09;3!UBERON:0003057;1.30e-09;3!UBERON:0003056;1.60e-09;3 | |ontology_enrichment_development_v019=UBERON:0006241;1.30e-09;3!UBERON:0003057;1.30e-09;3!UBERON:0003056;1.60e-09;3 | ||
|ontology_enrichment_disease=DOID:1909!5.32e-07!2 | |ontology_enrichment_disease=DOID:1909!5.32e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;7.77e-14;2 | |ontology_enrichment_disease_v019=DOID:1909;7.77e-14;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,7.30e-14,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002038;8.64e-26;1!UBERON:0009661;8.64e-26;1!UBERON:0002950;8.64e-26;1!UBERON:0001891;8.64e-26;1!UBERON:0002240;1.30e-09;3!UBERON:0005174;1.30e-09;3!UBERON:0001137;1.30e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002038;8.64e-26;1!UBERON:0009661;8.64e-26;1!UBERON:0002950;8.64e-26;1!UBERON:0001891;8.64e-26;1!UBERON:0002240;1.30e-09;3!UBERON:0005174;1.30e-09;3!UBERON:0001137;1.30e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.26e-25,1;UBERON:0009661,1.26e-25,1;UBERON:0002950,1.26e-25,1;UBERON:0001891,1.26e-25,1;UBERON:0009616,1.26e-25,1;UBERON:0010286,1.26e-25,1;UBERON:0002240,1.30e-09,3;UBERON:0005174,1.30e-09,3;UBERON:0001137,1.30e-09,3 | |||
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|short_description=p@chr15:33447055..33447064,- | |short_description=p@chr15:33447055..33447064,- | ||
}} | }} |
Latest revision as of 00:52, 25 July 2015
Short description: | p@chr15:33447055..33447064, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33447055..33447064, - |
Coexpression cluster: | C897_melanoma_Melanocyte_CD14_Macrophage_retina_myxofibrosarcoma_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.76e-23 | 10 |
melanoblast | 4.76e-23 | 10 |
pigment cell | 1.08e-16 | 14 |
neurecto-epithelial cell | 6.62e-12 | 20 |
light melanocyte | 1.01e-09 | 3 |
migratory neural crest cell | 1.12e-09 | 41 |
columnar/cuboidal epithelial cell | 5.43e-09 | 27 |
ecto-epithelial cell | 2.89e-07 | 34 |
neurectodermal cell | 6.26e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.26e-25 | 1 |
midbrain nucleus | 1.26e-25 | 1 |
regional part of midbrain | 1.26e-25 | 1 |
midbrain | 1.26e-25 | 1 |
presumptive midbrain | 1.26e-25 | 1 |
midbrain neural tube | 1.26e-25 | 1 |
spinal cord | 1.30e-09 | 3 |
dorsal region element | 1.30e-09 | 3 |
dorsum | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.30e-14 | 2 |