FFCP PHASE1:Hg19::chr16:85590587..85590602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85590587..85590602,- | |||
|description=CAGE_peak_at_chr16:85590587..85590602,- | |description=CAGE_peak_at_chr16:85590587..85590602,- | ||
|id=chr16:85590587..85590602,- | |id=chr16:85590587..85590602,- | ||
|ontology_enrichment_celltype=CL:0000838!4.31e-16!52;CL:0000542!1.15e-15!53;CL:0000051!1.15e-15!53;CL:0002031!2.30e-13!124;CL:0002032!3.84e-12!165;CL:0000837!3.84e-12!165;CL:0000988!1.63e-11!182;CL:0000037!3.34e-11!172;CL:0000566!3.34e-11!172;CL:0000738!6.73e-10!140;CL:0002087!1.43e-09!119;CL:0000791!1.35e-08!18;CL:0000789!1.35e-08!18;CL:0002420!1.35e-08!18;CL:0002419!1.35e-08!18;CL:0000790!1.35e-08!18;CL:0000084!1.68e-08!25;CL:0000827!1.68e-08!25;CL:0000623!7.36e-08!3;CL:0000825!7.36e-08!3;CL:0000625!9.49e-07!11 | |ontology_enrichment_celltype=CL:0000838!4.31e-16!52;CL:0000542!1.15e-15!53;CL:0000051!1.15e-15!53;CL:0002031!2.30e-13!124;CL:0002032!3.84e-12!165;CL:0000837!3.84e-12!165;CL:0000988!1.63e-11!182;CL:0000037!3.34e-11!172;CL:0000566!3.34e-11!172;CL:0000738!6.73e-10!140;CL:0002087!1.43e-09!119;CL:0000791!1.35e-08!18;CL:0000789!1.35e-08!18;CL:0002420!1.35e-08!18;CL:0002419!1.35e-08!18;CL:0000790!1.35e-08!18;CL:0000084!1.68e-08!25;CL:0000827!1.68e-08!25;CL:0000623!7.36e-08!3;CL:0000825!7.36e-08!3;CL:0000625!9.49e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.47e-07;11 | |ontology_enrichment_celltype_v019=CL:0000625;2.47e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.32e-07,11 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.98e-131;2!UBERON:0005058;8.98e-131;2!UBERON:0009113;8.98e-131;2!UBERON:0004177;2.86e-53;5!UBERON:0005057;2.86e-53;5!UBERON:0000077;6.56e-11;27!UBERON:0002405;6.56e-11;27!UBERON:0002368;2.51e-07;33!UBERON:0002390;2.51e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002370;8.98e-131;2!UBERON:0005058;8.98e-131;2!UBERON:0009113;8.98e-131;2!UBERON:0004177;2.86e-53;5!UBERON:0005057;2.86e-53;5!UBERON:0000077;6.56e-11;27!UBERON:0002405;6.56e-11;27!UBERON:0002368;2.51e-07;33!UBERON:0002390;2.51e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.67e-66,4;UBERON:0005058,4.67e-66,4;UBERON:0009113,4.67e-66,4;UBERON:0003295,4.67e-66,4;UBERON:0005562,4.67e-66,4;UBERON:0003351,1.52e-44,6;UBERON:0004177,2.18e-38,7;UBERON:0005057,2.18e-38,7;UBERON:0000974,2.72e-27,10;UBERON:0003408,2.72e-27,10;UBERON:0001042,2.72e-27,10;UBERON:0009145,2.72e-27,10;UBERON:0006562,6.20e-25,11;UBERON:0009722,6.20e-25,11;UBERON:0007690,6.20e-25,11;UBERON:0008814,9.75e-16,18;UBERON:0001557,5.66e-15,19;UBERON:0004807,1.54e-10,28;UBERON:0000077,3.24e-10,29;UBERON:0002368,1.18e-08,35;UBERON:0000949,5.75e-07,45 | |||
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| ||
|short_description=p@chr16:85590587..85590602,- | |short_description=p@chr16:85590587..85590602,- | ||
}} | }} |
Latest revision as of 13:00, 25 July 2015
Short description: | p@chr16:85590587..85590602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85590587..85590602, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.67e-66 | 4 |
hemolymphoid system gland | 4.67e-66 | 4 |
thymic region | 4.67e-66 | 4 |
pharyngeal gland | 4.67e-66 | 4 |
thymus primordium | 4.67e-66 | 4 |
pharyngeal epithelium | 1.52e-44 | 6 |
hemopoietic organ | 2.18e-38 | 7 |
immune organ | 2.18e-38 | 7 |
neck | 2.72e-27 | 10 |
gland of gut | 2.72e-27 | 10 |
chordate pharynx | 2.72e-27 | 10 |
pharyngeal region of foregut | 2.72e-27 | 10 |
pharynx | 6.20e-25 | 11 |
entire pharyngeal arch endoderm | 6.20e-25 | 11 |
early pharyngeal endoderm | 6.20e-25 | 11 |
pharyngeal arch system | 9.75e-16 | 18 |
upper respiratory tract | 5.66e-15 | 19 |
respiratory system epithelium | 1.54e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 3.24e-10 | 29 |
endocrine gland | 1.18e-08 | 35 |
endocrine system | 5.75e-07 | 45 |