FFCP PHASE1:Hg19::chr2:102758335..102758346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3554 | |EntrezGene=3554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |HGNC=5993 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3W8 | |UniProt=C9J3W8 | ||
|association_with_transcript=56bp_to_ENST00000428279_5end | |association_with_transcript=56bp_to_ENST00000428279_5end | ||
|cluster_id=chr2:102758335..102758346,+ | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_30_at_IL1R1_5end | |description=CAGE_peak_30_at_IL1R1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!1.56e-12!5;CL:0000188!1.49e-08!9;CL:0000594!5.84e-08!3;CL:0002504!4.41e-07!3;CL:1000279!4.41e-07!3;CL:1000280!4.41e-07!3;CL:0002548!4.69e-07!6 | |ontology_enrichment_celltype=CL:0000453!1.56e-12!5;CL:0000188!1.49e-08!9;CL:0000594!5.84e-08!3;CL:0002504!4.41e-07!3;CL:1000279!4.41e-07!3;CL:1000280!4.41e-07!3;CL:0002548!4.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002548;1.15e-42;6!CL:0002494;1.29e-28;16!CL:0000746;8.17e-11;3!CL:0000632;1.09e-10;3!CL:0000737;1.96e-08;4!CL:0000453;4.79e-07;5 | |ontology_enrichment_celltype_v019=CL:0002548;1.15e-42;6!CL:0002494;1.29e-28;16!CL:0000746;8.17e-11;3!CL:0000632;1.09e-10;3!CL:0000737;1.96e-08;4!CL:0000453;4.79e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002548,9.96e-43,6;CL:0002494,1.29e-28,16;CL:0000746,8.99e-11,3;CL:0000513,8.99e-11,3;CL:0000632,1.09e-10,3;CL:0000737,2.11e-08,4;CL:0000453,4.79e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000513;8.17e-11;3 | |ontology_enrichment_development_v019=CL:0000513;8.17e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.37e-07!63;UBERON:0001015!7.37e-07!63;UBERON:0000383!7.37e-07!63 | |ontology_enrichment_uberon=UBERON:0002385!7.37e-07!63;UBERON:0001015!7.37e-07!63;UBERON:0000383!7.37e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;5.39e-21;22!UBERON:0007100;1.50e-18;25 | |ontology_enrichment_uberon_v019=UBERON:0000948;5.39e-21;22!UBERON:0007100;1.50e-18;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.68e-19,24;UBERON:0005498,2.68e-19,24;UBERON:0004140,2.68e-19,24;UBERON:0009881,2.68e-19,24;UBERON:0004141,2.68e-19,24;UBERON:0003084,2.68e-19,24;UBERON:0007005,2.68e-19,24;UBERON:0004139,2.68e-19,24;UBERON:0004291,2.68e-19,24;UBERON:0007100,3.20e-17,27;UBERON:0003103,4.00e-07,68 | |||
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| ||
|short_description=p30@IL1R1 | |short_description=p30@IL1R1 | ||
}} | }} |
Latest revision as of 01:33, 16 September 2015
Short description: | p30@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_IL1R1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 56bp_to_ENST00000428279_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | C9J3W8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 9.96e-43 | 6 |
cardiocyte | 1.29e-28 | 16 |
cardiac muscle cell | 8.99e-11 | 3 |
cardiac muscle myoblast | 8.99e-11 | 3 |
hepatic stellate cell | 1.09e-10 | 3 |
striated muscle cell | 2.11e-08 | 4 |
Langerhans cell | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
heart | 2.68e-19 | 24 |
primitive heart tube | 2.68e-19 | 24 |
primary heart field | 2.68e-19 | 24 |
anterior lateral plate mesoderm | 2.68e-19 | 24 |
heart tube | 2.68e-19 | 24 |
heart primordium | 2.68e-19 | 24 |
cardiac mesoderm | 2.68e-19 | 24 |
cardiogenic plate | 2.68e-19 | 24 |
heart rudiment | 2.68e-19 | 24 |
primary circulatory organ | 3.20e-17 | 27 |
compound organ | 4.00e-07 | 68 |