FFCP PHASE1:Hg19::chr9:139379164..139379180,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:139379164..139379180,- | |||
|coexpression_cluster_id=C1549 | |coexpression_cluster_id=C1549 | ||
|description=CAGE_peak_at_chr9:139379164..139379180,- | |description=CAGE_peak_at_chr9:139379164..139379180,- | ||
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|ontology_enrichment_celltype=CL:0000066!1.65e-26!254;CL:0000223!2.73e-24!59;CL:0002076!1.19e-21!43;CL:0002159!7.20e-11!13;CL:0002368!8.45e-11!13;CL:0002251!1.38e-10!21;CL:0000076!8.53e-08!62 | |ontology_enrichment_celltype=CL:0000066!1.65e-26!254;CL:0000223!2.73e-24!59;CL:0002076!1.19e-21!43;CL:0002159!7.20e-11!13;CL:0002368!8.45e-11!13;CL:0002251!1.38e-10!21;CL:0000076!8.53e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.10e-24;42!CL:0002368;1.17e-24;13!CL:0002159;2.66e-17;14!CL:0002621;5.29e-16;3!CL:0000244;1.57e-12;4!CL:0000731;1.57e-12;4!CL:0000317;2.28e-11;2!CL:1000448;2.28e-11;2!CL:0002308;2.28e-11;2!CL:0002140;2.28e-11;2!CL:0000575;5.22e-11;2!CL:0000362;1.15e-09;9!CL:0002202;1.64e-09;9!CL:0002632;1.64e-09;9!CL:0002251;1.09e-08;20!CL:0002328;5.03e-08;3!CL:0002231;5.03e-08;3!CL:0000307;7.37e-08;3 | |ontology_enrichment_celltype_v019=CL:0002076;1.10e-24;42!CL:0002368;1.17e-24;13!CL:0002159;2.66e-17;14!CL:0002621;5.29e-16;3!CL:0000244;1.57e-12;4!CL:0000731;1.57e-12;4!CL:0000317;2.28e-11;2!CL:1000448;2.28e-11;2!CL:0002308;2.28e-11;2!CL:0002140;2.28e-11;2!CL:0000575;5.22e-11;2!CL:0000362;1.15e-09;9!CL:0002202;1.64e-09;9!CL:0002632;1.64e-09;9!CL:0002251;1.09e-08;20!CL:0002328;5.03e-08;3!CL:0002231;5.03e-08;3!CL:0000307;7.37e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.85e-28,42;CL:0000223,4.24e-25,58;CL:0002368,1.51e-24,13;CL:0002159,2.19e-17,14;CL:0002621,2.57e-16,3;CL:0000066,9.27e-16,253;CL:0000244,1.17e-12,4;CL:0000731,1.17e-12,4;CL:0000317,1.04e-11,2;CL:1000448,1.04e-11,2;CL:0002308,1.04e-11,2;CL:0002140,1.04e-11,2;CL:0000575,9.17e-11,2;CL:0000362,8.77e-10,9;CL:0002202,1.76e-09,9;CL:0002632,1.76e-09,9;CL:0002251,7.12e-09,20;CL:0002321,2.62e-08,250;CL:0002328,4.23e-08,3;CL:0002231,5.22e-08,3;CL:0000068,9.72e-08,3;CL:0000069,9.72e-08,3;CL:0000307,9.72e-08,3;CL:0000377,9.72e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.13e-15;58!CL:0000377;7.37e-08;3!UBERON:0008425;7.14e-07;1 | |ontology_enrichment_development_v019=CL:0000223;3.13e-15;58!CL:0000377;7.37e-08;3!UBERON:0008425;7.14e-07;1 | ||
|ontology_enrichment_disease=DOID:305!9.94e-16!106;DOID:1749!4.80e-13!14;DOID:0050687!1.04e-10!143 | |ontology_enrichment_disease=DOID:305!9.94e-16!106;DOID:1749!4.80e-13!14;DOID:0050687!1.04e-10!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.50e-23!169;UBERON:0000925!2.50e-23!169;UBERON:0006595!2.50e-23!169;UBERON:0001007!9.98e-19!155;UBERON:0001555!9.98e-19!155;UBERON:0007026!9.98e-19!155;UBERON:0001004!3.29e-16!72;UBERON:0005911!7.26e-14!82;UBERON:0000077!1.92e-13!130;UBERON:0001041!1.08e-12!98;UBERON:0004921!1.12e-12!129;UBERON:0004185!1.12e-12!129;UBERON:0002365!1.63e-12!31;UBERON:0002330!1.63e-12!31;UBERON:0002530!5.03e-12!59;UBERON:0003929!2.36e-11!54;UBERON:0000065!1.47e-09!53;UBERON:0000161!1.54e-09!35;UBERON:0000481!2.44e-09!347;UBERON:0000166!1.32e-08!21;UBERON:0003104!1.80e-08!238;UBERON:0009142!1.80e-08!238;UBERON:0009497!8.45e-08!25;UBERON:0000015!8.45e-08!25;UBERON:0002423!8.45e-08!25;UBERON:0006235!8.45e-08!25;UBERON:0004161!8.45e-08!25;UBERON:0000165!1.12e-07!28;UBERON:0000930!1.12e-07!28;UBERON:0000475!2.26e-07!365;UBERON:0000072!2.30e-07!46;UBERON:0003729!3.07e-07!5 | |ontology_enrichment_uberon=UBERON:0004119!2.50e-23!169;UBERON:0000925!2.50e-23!169;UBERON:0006595!2.50e-23!169;UBERON:0001007!9.98e-19!155;UBERON:0001555!9.98e-19!155;UBERON:0007026!9.98e-19!155;UBERON:0001004!3.29e-16!72;UBERON:0005911!7.26e-14!82;UBERON:0000077!1.92e-13!130;UBERON:0001041!1.08e-12!98;UBERON:0004921!1.12e-12!129;UBERON:0004185!1.12e-12!129;UBERON:0002365!1.63e-12!31;UBERON:0002330!1.63e-12!31;UBERON:0002530!5.03e-12!59;UBERON:0003929!2.36e-11!54;UBERON:0000065!1.47e-09!53;UBERON:0000161!1.54e-09!35;UBERON:0000481!2.44e-09!347;UBERON:0000166!1.32e-08!21;UBERON:0003104!1.80e-08!238;UBERON:0009142!1.80e-08!238;UBERON:0009497!8.45e-08!25;UBERON:0000015!8.45e-08!25;UBERON:0002423!8.45e-08!25;UBERON:0006235!8.45e-08!25;UBERON:0004161!8.45e-08!25;UBERON:0000165!1.12e-07!28;UBERON:0000930!1.12e-07!28;UBERON:0000475!2.26e-07!365;UBERON:0000072!2.30e-07!46;UBERON:0003729!3.07e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.29e-16;3!UBERON:0000486;4.10e-15;12!UBERON:0002419;2.28e-11;2!UBERON:0007771;2.28e-11;2!UBERON:0003297;2.28e-11;2!UBERON:0001821;2.28e-11;2!UBERON:0003487;2.28e-11;2!UBERON:0001820;2.28e-11;2!UBERON:0000365;4.05e-10;5!UBERON:0003729;1.01e-09;13!UBERON:0005910;1.66e-08;6!UBERON:0004815;5.03e-08;3!UBERON:0002031;5.03e-08;3!UBERON:0002365;1.57e-07;31!UBERON:0002330;1.57e-07;31!UBERON:0010371;1.78e-07;31!UBERON:0003929;3.96e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001949;5.29e-16;3!UBERON:0000486;4.10e-15;12!UBERON:0002419;2.28e-11;2!UBERON:0007771;2.28e-11;2!UBERON:0003297;2.28e-11;2!UBERON:0001821;2.28e-11;2!UBERON:0003487;2.28e-11;2!UBERON:0001820;2.28e-11;2!UBERON:0000365;4.05e-10;5!UBERON:0003729;1.01e-09;13!UBERON:0005910;1.66e-08;6!UBERON:0004815;5.03e-08;3!UBERON:0002031;5.03e-08;3!UBERON:0002365;1.57e-07;31!UBERON:0002330;1.57e-07;31!UBERON:0010371;1.78e-07;31!UBERON:0003929;3.96e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.57e-16,3;UBERON:0004119,2.04e-13,160;UBERON:0000925,2.04e-13,160;UBERON:0006595,2.04e-13,160;UBERON:0002419,1.04e-11,2;UBERON:0007771,1.04e-11,2;UBERON:0003297,1.04e-11,2;UBERON:0001821,1.04e-11,2;UBERON:0003487,1.04e-11,2;UBERON:0001820,1.04e-11,2;UBERON:0005089,1.04e-11,2;UBERON:0005088,1.04e-11,2;UBERON:0000365,3.21e-10,5;UBERON:0003729,6.78e-10,13;UBERON:0005911,1.34e-09,82;UBERON:0001004,3.29e-09,74;UBERON:0005910,1.38e-08,6;UBERON:0003102,1.48e-08,99;UBERON:0004815,4.23e-08,3;UBERON:0002031,4.23e-08,3;UBERON:0002365,1.69e-07,31;UBERON:0002330,1.69e-07,31 | |||
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| ||
|short_description=p@chr9:139379164..139379180,- | |short_description=p@chr9:139379164..139379180,- | ||
}} | }} |
Latest revision as of 00:19, 1 August 2015
Short description: | p@chr9:139379164..139379180, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139379164..139379180, - |
Coexpression cluster: | C1549_breast_liver_Sebocyte_Hepatocyte_pancreas_Bronchial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.85e-28 | 42 |
endodermal cell | 4.24e-25 | 58 |
respiratory epithelial cell | 1.51e-24 | 13 |
general ecto-epithelial cell | 2.19e-17 | 14 |
gingival epithelial cell | 2.57e-16 | 3 |
epithelial cell | 9.27e-16 | 253 |
transitional epithelial cell | 1.17e-12 | 4 |
urothelial cell | 1.17e-12 | 4 |
sebum secreting cell | 1.04e-11 | 2 |
epithelial cell of sweat gland | 1.04e-11 | 2 |
epithelial cell of skin gland | 1.04e-11 | 2 |
acinar cell of sebaceous gland | 1.04e-11 | 2 |
corneal epithelial cell | 9.17e-11 | 2 |
epidermal cell | 8.77e-10 | 9 |
epithelial cell of tracheobronchial tree | 1.76e-09 | 9 |
epithelial cell of lower respiratory tract | 1.76e-09 | 9 |
epithelial cell of alimentary canal | 7.12e-09 | 20 |
embryonic cell | 2.62e-08 | 250 |
bronchial epithelial cell | 4.23e-08 | 3 |
epithelial cell of prostate | 5.22e-08 | 3 |
duct epithelial cell | 9.72e-08 | 3 |
branched duct epithelial cell | 9.72e-08 | 3 |
tracheal epithelial cell | 9.72e-08 | 3 |
tracheoblast | 9.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.57e-16 | 3 |
endoderm-derived structure | 2.04e-13 | 160 |
endoderm | 2.04e-13 | 160 |
presumptive endoderm | 2.04e-13 | 160 |
skin gland | 1.04e-11 | 2 |
epidermis gland | 1.04e-11 | 2 |
gland of integumental system | 1.04e-11 | 2 |
sebaceous gland | 1.04e-11 | 2 |
skin sebaceous gland | 1.04e-11 | 2 |
sweat gland | 1.04e-11 | 2 |
sweat gland placode | 1.04e-11 | 2 |
sebaceous gland placode | 1.04e-11 | 2 |
urothelium | 3.21e-10 | 5 |
mouth mucosa | 6.78e-10 | 13 |
endo-epithelium | 1.34e-09 | 82 |
respiratory system | 3.29e-09 | 74 |
transitional epithelium | 1.38e-08 | 6 |
surface structure | 1.48e-08 | 99 |
lower respiratory tract epithelium | 4.23e-08 | 3 |
epithelium of bronchus | 4.23e-08 | 3 |
exocrine gland | 1.69e-07 | 31 |
exocrine system | 1.69e-07 | 31 |