FFCP PHASE1:Hg19::chr2:172950053..172950081,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:172950053..172950081,- | |||
|coexpression_cluster_id=C1884 | |coexpression_cluster_id=C1884 | ||
|description=CAGE_peak_at_chr2:172950053..172950081,- | |description=CAGE_peak_at_chr2:172950053..172950081,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002552;3.05e-09;5!CL:0000346;4.46e-09;3!CL:1000428;4.46e-09;3!CL:0002556;5.95e-08;6 | |ontology_enrichment_celltype_v019=CL:0002552;3.05e-09;5!CL:0000346;4.46e-09;3!CL:1000428;4.46e-09;3!CL:0002556;5.95e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002552,2.54e-09,5;CL:0000346,4.29e-09,3;CL:1000428,4.29e-09,3;CL:0002556,2.69e-08,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.09e-19!235;DOID:14566!2.01e-19!239;DOID:0050687!6.70e-19!143;DOID:305!6.27e-12!106 | |ontology_enrichment_disease=DOID:162!1.09e-19!235;DOID:14566!2.01e-19!239;DOID:0050687!6.70e-19!143;DOID:305!6.27e-12!106 | ||
|ontology_enrichment_disease_v019=DOID:4231;5.49e-07;2!DOID:1907;5.49e-07;2 | |ontology_enrichment_disease_v019=DOID:4231;5.49e-07;2!DOID:1907;5.49e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4231,3.44e-07,2;DOID:1907,3.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.93e-07!40 | |ontology_enrichment_uberon=UBERON:0002097!3.93e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;4.46e-09;3!UBERON:0001992;4.46e-09;3!UBERON:0001758;5.95e-08;6!UBERON:0003672;5.95e-08;6!UBERON:0001474;3.61e-07;18!UBERON:0003129;8.20e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000412;4.46e-09;3!UBERON:0001992;4.46e-09;3!UBERON:0001758;5.95e-08;6!UBERON:0003672;5.95e-08;6!UBERON:0001474;3.61e-07;18!UBERON:0003129;8.20e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,4.29e-09,3;UBERON:0001992,4.29e-09,3;UBERON:0001758,2.69e-08,6;UBERON:0003672,2.69e-08,6;UBERON:0000165,3.04e-08,29;UBERON:0000930,3.04e-08,29;UBERON:0003102,2.02e-07,99;UBERON:0003129,4.19e-07,7;UBERON:0010323,8.90e-07,11 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.619412741790207,0,0,0,0.689491361473237,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0.204154171254893,1.22834317311768,1.44656093646072,1.18800285728205,1.97813543422845,0,0,0.168336113954066,0.500474079487857,1.93944880838928,1.75591048352335,1.5324389789951,2.10333282469236,0,0,1.06778694409284,0.635795703478686,0.900273288253207,0.103052529238439,0.257640540045629,0.18611685633159,0.675105328965065,0.292311015483596,0.504867548488229,0.644349290496095,0,0.355009592516614,1.0075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,1.18306800039844,0.505754070234305,0.482022059766964,0.661763836394364,1.08939722046203,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28603687131071,1.41849132023278,2.1313774321288,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.112085143993527,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,2.01019518401218,1.91381625495949,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.234282829985426,0,0,1.03473071292505,0.664225598535437,0.921845842708516,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915694648183434,1.07262349896764,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0,0,0,0,0.95460974377781,1.56989728039846,0,0,0,0,0,0.842516912477962,0,0.731140468893853,0,0,0,0,3.85955740482287,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0.245040215981032,0,0,0,0.318852545457645,0,0,2.75175657541048,0,0,0,0.313359791546046,0,0,1.4452926759333,1.00899853595524,0,0,0,0,0,0.976940477010201,0,0,0.270455678475983,0.33307196799782,0,0,0,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0.667852230137435,0.329607748453519,0.422250816255987,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0,0,0,3.06943422136123,0,0,0,0,0.278304294485554,1.99613798001194,0.520855522170466,0.262379999988587,0,0.1137934482855,0,0.472775363535873,0.344743373241465,0.583209226766509,0.347249989866585,0,0,0,0,0,0.438770794307945,0.21787692703798,0.83654246567162,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0.451191321234361,0.784250137270958,1.1747511088309,0,0,0,0,0.282706142867882,0.865554558968364,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0.586993856796269,0.485560759068186,0,0,5.50930970934882,0,0.751617097072463,1.45163467956146,0,0,0.941798755221676,1.19472429772959,0,0,0,0.881931576729399,1.39294730528644,0,0.51595809741485,0.483781656445426,0.511625219603299,0.410577285266046,0.0969890164884194,0,0,0.274083849293502,0.993573058514948,0.189932387867636,0.195551382734803,0,0,0.599428828746391,0.432271251462318,0.114536596165916,2.4023299700675,0.432164393964449,0.248505071130865,0,0,0.209205692624666,1.01998217636322,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0.0824158583811665,0.13480708770837,0.590564889088493,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.182248669974074,0.670869375198532,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,1.64185041498678,0.511164065356265,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.121792598380896,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.999843263696853,1.21319294033318,0.285465333544967,0,0,0.434763085832475,0,0,0,0.378806010550178,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0.192619830407303,0.428883182749851,0,1.13352962756136,1.15761237161917,0.489473409012935,0.179088841081487,0.926404341482917,0.657852148736121,0.176689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| ||
|short_description=p@chr2:172950053..172950081,- | |short_description=p@chr2:172950053..172950081,- | ||
}} | }} |
Latest revision as of 02:28, 29 July 2015
Short description: | p@chr2:172950053..172950081, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:172950053..172950081, - |
Coexpression cluster: | C1884_small_parietal_temporal_duodenum_occipital_rhabdomyosarcoma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 2.54e-09 | 5 |
hair follicle dermal papilla cell | 4.29e-09 | 3 |
stem cell of epidermis | 4.29e-09 | 3 |
fibroblast of periodontium | 2.69e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 4.29e-09 | 3 |
papillary layer of dermis | 4.29e-09 | 3 |
periodontium | 2.69e-08 | 6 |
dentition | 2.69e-08 | 6 |
mouth | 3.04e-08 | 29 |
stomodeum | 3.04e-08 | 29 |
surface structure | 2.02e-07 | 99 |
skull | 4.19e-07 | 7 |
cranial skeletal system | 8.90e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 3.44e-07 | 2 |
malignant fibroxanthoma | 3.44e-07 | 2 |