FFCP PHASE1:Hg19::chr15:41136506..41136509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6692 | |EntrezGene=6692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11246 | |HGNC=11246 | ||
|TSSclassifier=strong | |||
|UniProt=O43278 | |UniProt=O43278 | ||
|association_with_transcript=-133bp_to_ENST00000431806,NM_001032367,uc001znc.2_5end | |association_with_transcript=-133bp_to_ENST00000431806,NM_001032367,uc001znc.2_5end | ||
|cluster_id=chr15:41136506..41136509,+ | |||
|description=CAGE_peak_11_at_SPINT1_5end | |description=CAGE_peak_11_at_SPINT1_5end | ||
|id=chr15:41136506..41136509,+ | |id=chr15:41136506..41136509,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.29e-23!254;CL:0002076!7.25e-17!43;CL:0000223!2.18e-14!59;CL:0002368!3.81e-08!13;CL:0002251!4.31e-08!21;CL:0000039!3.57e-07!7;CL:0000586!3.57e-07!7 | |ontology_enrichment_celltype=CL:0000066!2.29e-23!254;CL:0002076!7.25e-17!43;CL:0000223!2.18e-14!59;CL:0002368!3.81e-08!13;CL:0002251!4.31e-08!21;CL:0000039!3.57e-07!7;CL:0000586!3.57e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002368;5.29e-20;13!CL:0002202;8.05e-19;9!CL:0002632;8.05e-19;9!CL:0002328;6.53e-15;3!CL:0002076;4.10e-14;42!CL:0000082;4.84e-09;19!CL:0000039;6.77e-07;7!CL:0000586;6.77e-07;7 | |ontology_enrichment_celltype_v019=CL:0002368;5.29e-20;13!CL:0002202;8.05e-19;9!CL:0002632;8.05e-19;9!CL:0002328;6.53e-15;3!CL:0002076;4.10e-14;42!CL:0000082;4.84e-09;19!CL:0000039;6.77e-07;7!CL:0000586;6.77e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.87e-20,58;CL:0002368,1.11e-19,13;CL:0002076,6.11e-19,42;CL:0002202,1.85e-18,9;CL:0002632,1.85e-18,9;CL:0002328,9.30e-15,3;CL:0000066,5.02e-11,253;CL:0000082,5.63e-09,19;CL:0000039,6.98e-07,7;CL:0000586,6.98e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;4.71e-09;58 | |ontology_enrichment_development_v019=CL:0000223;4.71e-09;58 | ||
|ontology_enrichment_disease=DOID:305!6.20e-17!106;DOID:1749!3.94e-12!14;DOID:0050687!1.15e-11!143 | |ontology_enrichment_disease=DOID:305!6.20e-17!106;DOID:1749!3.94e-12!14;DOID:0050687!1.15e-11!143 | ||
|ontology_enrichment_disease_v019=DOID:1799;8.17e-12;1!DOID:0050619;8.17e-12;1!DOID:10165;8.17e-12;1!DOID:1357;8.17e-12;1!DOID:1798;8.17e-12;1!DOID:1325;6.77e-07;7!DOID:3904;6.77e-07;7 | |ontology_enrichment_disease_v019=DOID:1799;8.17e-12;1!DOID:0050619;8.17e-12;1!DOID:10165;8.17e-12;1!DOID:1357;8.17e-12;1!DOID:1798;8.17e-12;1!DOID:1325;6.77e-07;7!DOID:3904;6.77e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.46e-12,106;DOID:0050619,6.26e-12,1;DOID:1357,6.26e-12,1;DOID:1799,7.76e-12,1;DOID:10165,7.76e-12,1;DOID:1798,7.76e-12,1;DOID:0050687,7.59e-09,143;DOID:1325,7.19e-07,7;DOID:3904,7.19e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.56e-15!169;UBERON:0000925!3.56e-15!169;UBERON:0006595!3.56e-15!169;UBERON:0001007!9.20e-12!155;UBERON:0001555!9.20e-12!155;UBERON:0007026!9.20e-12!155;UBERON:0005153!1.07e-09!37;UBERON:0005911!1.32e-09!82;UBERON:0001004!1.58e-09!72;UBERON:0004921!2.21e-09!129;UBERON:0004185!2.21e-09!129;UBERON:0000077!8.26e-09!130;UBERON:0005178!1.30e-08!34;UBERON:0002224!1.30e-08!34;UBERON:0000464!1.42e-08!104;UBERON:0005181!3.19e-08!35;UBERON:0000065!5.60e-08!53;UBERON:0005157!8.14e-08!51;UBERON:0000344!3.30e-07!12;UBERON:0000466!4.68e-07!126;UBERON:0000915!6.02e-07!52 | |ontology_enrichment_uberon=UBERON:0004119!3.56e-15!169;UBERON:0000925!3.56e-15!169;UBERON:0006595!3.56e-15!169;UBERON:0001007!9.20e-12!155;UBERON:0001555!9.20e-12!155;UBERON:0007026!9.20e-12!155;UBERON:0005153!1.07e-09!37;UBERON:0005911!1.32e-09!82;UBERON:0001004!1.58e-09!72;UBERON:0004921!2.21e-09!129;UBERON:0004185!2.21e-09!129;UBERON:0000077!8.26e-09!130;UBERON:0005178!1.30e-08!34;UBERON:0002224!1.30e-08!34;UBERON:0000464!1.42e-08!104;UBERON:0005181!3.19e-08!35;UBERON:0000065!5.60e-08!53;UBERON:0005157!8.14e-08!51;UBERON:0000344!3.30e-07!12;UBERON:0000466!4.68e-07!126;UBERON:0000915!6.02e-07!52 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.53e-15;3!UBERON:0002031;6.53e-15;3!UBERON:0001764;8.17e-12;1!UBERON:0001825;8.17e-12;1!UBERON:0003343;2.02e-11;4!UBERON:0004785;2.02e-11;4!UBERON:0007196;2.13e-11;15!UBERON:0001558;2.13e-11;15!UBERON:0002185;2.57e-09;5!UBERON:0004802;4.84e-09;19!UBERON:0000115;4.84e-09;19!UBERON:0000974;6.59e-08;6!UBERON:0002048;7.84e-08;22!UBERON:0004807;7.84e-08;22!UBERON:0000117;7.84e-08;22!UBERON:0000171;7.84e-08;22!UBERON:0000170;7.84e-08;22!UBERON:0005181;5.50e-07;35!UBERON:0005911;6.43e-07;36!UBERON:0000485;6.77e-07;7!UBERON:0006562;9.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004815;6.53e-15;3!UBERON:0002031;6.53e-15;3!UBERON:0001764;8.17e-12;1!UBERON:0001825;8.17e-12;1!UBERON:0003343;2.02e-11;4!UBERON:0004785;2.02e-11;4!UBERON:0007196;2.13e-11;15!UBERON:0001558;2.13e-11;15!UBERON:0002185;2.57e-09;5!UBERON:0004802;4.84e-09;19!UBERON:0000115;4.84e-09;19!UBERON:0000974;6.59e-08;6!UBERON:0002048;7.84e-08;22!UBERON:0004807;7.84e-08;22!UBERON:0000117;7.84e-08;22!UBERON:0000171;7.84e-08;22!UBERON:0000170;7.84e-08;22!UBERON:0005181;5.50e-07;35!UBERON:0005911;6.43e-07;36!UBERON:0000485;6.77e-07;7!UBERON:0006562;9.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,9.30e-15,3;UBERON:0002031,9.30e-15,3;UBERON:0001764,6.26e-12,1;UBERON:0001825,6.26e-12,1;UBERON:0003343,1.92e-11,4;UBERON:0004785,1.92e-11,4;UBERON:0007196,3.48e-11,15;UBERON:0001558,3.48e-11,15;UBERON:0001004,3.22e-10,74;UBERON:0002185,3.17e-09,5;UBERON:0004802,5.63e-09,19;UBERON:0000115,5.63e-09,19;UBERON:0002048,8.92e-08,22;UBERON:0000117,8.92e-08,22;UBERON:0000171,8.92e-08,22;UBERON:0000170,8.92e-08,22;UBERON:0005597,8.92e-08,22;UBERON:0000118,8.92e-08,22;UBERON:0005178,1.63e-07,34;UBERON:0002224,1.63e-07,34;UBERON:0005181,2.69e-07,35 | |||
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| ||
|short_description=p11@SPINT1 | |short_description=p11@SPINT1 | ||
}} | }} |
Latest revision as of 14:00, 17 September 2015
Short description: | p11@SPINT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SPINT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -133bp_to_ENST00000431806, NM_001032367, uc001znc.2_5end |
EntrezGene: | SPINT1 |
HGNC: | 11246 |
UniProt: | O43278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.87e-20 | 58 |
respiratory epithelial cell | 1.11e-19 | 13 |
endo-epithelial cell | 6.11e-19 | 42 |
epithelial cell of tracheobronchial tree | 1.85e-18 | 9 |
epithelial cell of lower respiratory tract | 1.85e-18 | 9 |
bronchial epithelial cell | 9.30e-15 | 3 |
epithelial cell | 5.02e-11 | 253 |
epithelial cell of lung | 5.63e-09 | 19 |
germ line cell | 6.98e-07 | 7 |
germ cell | 6.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 9.30e-15 | 3 |
epithelium of bronchus | 9.30e-15 | 3 |
maxillary sinus | 6.26e-12 | 1 |
paranasal sinus | 6.26e-12 | 1 |
mucosa of oral region | 1.92e-11 | 4 |
respiratory system mucosa | 1.92e-11 | 4 |
tracheobronchial tree | 3.48e-11 | 15 |
lower respiratory tract | 3.48e-11 | 15 |
respiratory system | 3.22e-10 | 74 |
bronchus | 3.17e-09 | 5 |
respiratory tract epithelium | 5.63e-09 | 19 |
lung epithelium | 5.63e-09 | 19 |
lung | 8.92e-08 | 22 |
respiratory tube | 8.92e-08 | 22 |
respiration organ | 8.92e-08 | 22 |
pair of lungs | 8.92e-08 | 22 |
lung primordium | 8.92e-08 | 22 |
lung bud | 8.92e-08 | 22 |
thoracic cavity element | 1.63e-07 | 34 |
thoracic cavity | 1.63e-07 | 34 |
thoracic segment organ | 2.69e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.46e-12 | 106 |
paranasal sinus cancer | 6.26e-12 | 1 |
maxillary sinus cancer | 6.26e-12 | 1 |
islet cell tumor | 7.76e-12 | 1 |
endocrine pancreas cancer | 7.76e-12 | 1 |
pancreatic endocrine carcinoma | 7.76e-12 | 1 |
cell type cancer | 7.59e-09 | 143 |
bronchus cancer | 7.19e-07 | 7 |
bronchogenic carcinoma | 7.19e-07 | 7 |