FFCP PHASE1:Hg19::chr1:94995771..94995826,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:94995771..94995826,-
|short_description=p@chr1:94995771..94995826,-
|description=CAGE_peak_at_chr1:94995771..94995826,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:94995771..94995826,- | |||
|coexpression_cluster_id=C935 | |||
|description=CAGE_peak_at_chr1:94995771..94995826,- | |||
|id=chr1:94995771..94995826,- | |||
|ontology_enrichment_celltype=CL:0002076!1.66e-14!43;CL:0000066!3.23e-11!254;CL:0000223!5.96e-11!59;CL:0002368!3.00e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.37e-15;42!CL:0002368;6.01e-11;13!CL:0002621;5.87e-09;3!CL:0002166;9.99e-09;3!CL:0002251;1.65e-08;20!CL:0000307;1.15e-07;3!CL:0002159;1.29e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.87e-18,42;CL:0000066,3.14e-16,253;CL:0000223,4.70e-13,58;CL:0002368,5.85e-11,13;CL:0002621,5.84e-09,3;CL:0002166,8.98e-09,3;CL:0002251,2.20e-08,20;CL:0002159,1.20e-07,14;CL:0000068,2.08e-07,3;CL:0000069,2.08e-07,3;CL:0000307,2.08e-07,3;CL:0000377,2.08e-07,3;CL:0000076,2.16e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000377;1.15e-07;3!CL:0000223;1.22e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;3.27e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.38e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000062!5.75e-11!511;UBERON:0000475!4.63e-08!365;UBERON:0000468!7.45e-08!659;UBERON:0000467!1.16e-07!625;UBERON:0000480!1.50e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.87e-09;3!UBERON:0000486;2.11e-07;12!UBERON:0000344;6.30e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.84e-09,3;UBERON:0004119,1.48e-07,160;UBERON:0000925,1.48e-07,160;UBERON:0006595,1.48e-07,160;UBERON:0005911,7.60e-07,82;UBERON:0000344,7.97e-07,20 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0.982935746006035,1.39560233594486,1.09220686065086,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0.393364276848904,0,0,0.919421224478927,2.71085326900425,0,0,0,0,1.66198622559563,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0.822335776043652,0,0.863077176966451,0.512321413058201,0.47296445977717,1.37898272294647,1.29096936716765,2.70852973188684,0,0,0,2.14258724659632,1.28371610830437,1.27867425159808,0,0,0,2.32167390902867,1.70215567407342,9.34233373493363,0.251248665256743,0,0,0,4.05105399586321,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.378139268656271,0,0.351339142772504,0.130979075497713,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.756787138224657,1.72852777344,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0,0.504867548488229,0.368199594569197,0,0.355009592516614,0.302256294682921,0,4.44499962275583,8.45512973831587,6.02289650316908,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,4.2802611309364,1.1240175325762,1.70899253099772,1.11106134190236,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0.936017060556951,0.148631162288728,4.68669169933885,3.35964256397719,5.38745369521069,0.895585227028483,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.62786481617433,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.512556597022804,0,0,0,0.154209693802656,0.887808626565635,0.492762936082855,0,0.464841513839837,0,3.20810352485256,0.276242966807689,1.26295892981067,0,0.131124414959424,1.80479845162965,0.385076685522074,1.56869953835371,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0.165018999841176,0,0.650060246036521,1.6068392984416,0,0.308097234229289,0.614014698904518,0.137836572484531,0.322260734604821,0,0,0,4.46269271474641,8.84074309879488,6.63586104971837,1.92199783625545,0.464845549297286,1.88887408098384,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,1.43897966066652,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0,0,0.409499734223957,0.707027159768564,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0,2.69421915631434,2.01090682660736,1.08890984861323,0.0941438007767792,3.01353760869861,3.36942951335251,0.443430153536676,3.67557440331135,0,0,0,0,0,0,0,0,0.106824071127473,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0.921482106297696,0,0.281338832821026,0,0,0,0,0,0,0,0,0.311039587661807,2.24670877868317,3.9384658428634,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.227586896570999,0.508507300585533,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.658156191461918,0,0.557694977114413,0.153900517007594,0.455768223388005,0.922255617552241,0.0897576444097721,0,0,0.824378340616761,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0.134802265961354,0,0.702793337176017,0,0.586993856796269,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0.347119476670262,2.6457947301882,1.39294730528644,0,0,0,0,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,0,0.586654148204409,4.00794101257669,0,0.599428828746391,0.144090417154106,0.114536596165916,0,0.432164393964449,0.124252535565433,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,0,3.43812353135966,0,0.279282401272254,0.229160424011684,0,0,0,0.89268582976749,0.268733889946905,2.16179930125442,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,2.87872795979168,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,1.29282956361551,0.13223260174269,0.171086837884329,2.11444506695002,0.213574825135389,0.314408610199332,0,0,0,0,4.46838880439127,2.72008901684737,2.2562090462043,0.612691153526923,2.95085367638824,0,0.886068179966986,0,0.250381861413,1.14681839138014,0.110929051536852,0.310482014706917,0,0.62490203981053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| ||
|short_description=p@chr1:94995771..94995826,- | |||
}} | }} |
Latest revision as of 11:32, 28 July 2015
Short description: | p@chr1:94995771..94995826, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94995771..94995826, - |
Coexpression cluster: | C935_Small_Mallassezderived_Gingival_normal_mucinous_Urothelial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.87e-18 | 42 |
epithelial cell | 3.14e-16 | 253 |
endodermal cell | 4.70e-13 | 58 |
respiratory epithelial cell | 5.85e-11 | 13 |
gingival epithelial cell | 5.84e-09 | 3 |
epithelial cell of Malassez | 8.98e-09 | 3 |
epithelial cell of alimentary canal | 2.20e-08 | 20 |
general ecto-epithelial cell | 1.20e-07 | 14 |
duct epithelial cell | 2.08e-07 | 3 |
branched duct epithelial cell | 2.08e-07 | 3 |
tracheal epithelial cell | 2.08e-07 | 3 |
tracheoblast | 2.08e-07 | 3 |
squamous epithelial cell | 2.16e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.84e-09 | 3 |
endoderm-derived structure | 1.48e-07 | 160 |
endoderm | 1.48e-07 | 160 |
presumptive endoderm | 1.48e-07 | 160 |
endo-epithelium | 7.60e-07 | 82 |
mucosa | 7.97e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.38e-12 | 14 |