FFCP PHASE1:Hg19::chr3:112823266..112823272,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112823266..112823272,- | |||
|description=CAGE_peak_at_chr3:112823266..112823272,- | |description=CAGE_peak_at_chr3:112823266..112823272,- | ||
|id=chr3:112823266..112823272,- | |id=chr3:112823266..112823272,- | ||
|ontology_enrichment_celltype=CL:0002322!4.54e-31!5;CL:0002603!9.11e-30!3;CL:0000064!1.32e-13!3;CL:0005012!1.32e-13!3;CL:0000067!1.32e-13!3;CL:0002304!1.32e-13!3;CL:0000128!4.05e-13!7;CL:0000126!4.05e-13!7;CL:0000127!4.05e-13!7;CL:0002453!4.05e-13!7;CL:0000710!6.15e-12!20;CL:0000133!1.34e-11!59;CL:0000221!1.74e-09!71;CL:0000148!2.43e-09!10;CL:0000541!2.43e-09!10;CL:0000075!8.34e-09!27;CL:0000333!1.02e-07!41;CL:0002077!3.58e-07!33;CL:0000147!8.36e-07!14 | |ontology_enrichment_celltype=CL:0002322!4.54e-31!5;CL:0002603!9.11e-30!3;CL:0000064!1.32e-13!3;CL:0005012!1.32e-13!3;CL:0000067!1.32e-13!3;CL:0002304!1.32e-13!3;CL:0000128!4.05e-13!7;CL:0000126!4.05e-13!7;CL:0000127!4.05e-13!7;CL:0002453!4.05e-13!7;CL:0000710!6.15e-12!20;CL:0000133!1.34e-11!59;CL:0000221!1.74e-09!71;CL:0000148!2.43e-09!10;CL:0000541!2.43e-09!10;CL:0000075!8.34e-09!27;CL:0000333!1.02e-07!41;CL:0002077!3.58e-07!33;CL:0000147!8.36e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002603;2.62e-23;3!CL:0002322;1.83e-14;5!CL:0000128;8.16e-11;7!CL:0000126;8.16e-11;7!CL:0000127;8.16e-11;7!CL:0000148;6.56e-08;10 | |ontology_enrichment_celltype_v019=CL:0002603;2.62e-23;3!CL:0002322;1.83e-14;5!CL:0000128;8.16e-11;7!CL:0000126;8.16e-11;7!CL:0000127;8.16e-11;7!CL:0000148;6.56e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002603,2.62e-23,3;CL:0002322,1.83e-14,5;CL:0000128,8.16e-11,7;CL:0000126,8.16e-11,7;CL:0000127,8.16e-11,7;CL:0002453,8.16e-11,7;CL:0000148,6.56e-08,10;CL:0000541,6.56e-08,10;CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!3.73e-28!12;UBERON:0002028!3.73e-28!12;UBERON:0007277!3.73e-28!12;UBERON:0002680!1.32e-26!9;UBERON:0001895!1.32e-26!9;UBERON:0010092!1.32e-26!9;UBERON:0002037!4.60e-26!6;UBERON:0006215!4.60e-26!6;UBERON:0004732!5.76e-26!13;UBERON:0003076!1.84e-22!15;UBERON:0003057!1.84e-22!15;UBERON:0001778!1.32e-13!3;UBERON:0001775!1.32e-13!3;UBERON:0002363!6.77e-11!1;UBERON:0007647!6.77e-11!1;UBERON:0010115!6.77e-11!1;UBERON:0002336!1.61e-10!1;UBERON:0001018!1.61e-10!1;UBERON:0002473!1.61e-10!1;UBERON:0005340!1.61e-10!1;UBERON:0002316!1.61e-10!1;UBERON:0003544!1.61e-10!1;UBERON:0001020!1.61e-10!1;UBERON:0005970!1.61e-10!1;UBERON:0002437!1.61e-10!1;UBERON:0000488!1.95e-10!4;UBERON:0003075!2.01e-09!86;UBERON:0007284!2.01e-09!86;UBERON:0002346!6.04e-09!90;UBERON:0001017!6.09e-08!82;UBERON:0005743!1.59e-07!86;UBERON:0001049!2.63e-07!57;UBERON:0005068!2.63e-07!57;UBERON:0006241!2.63e-07!57;UBERON:0007135!2.63e-07!57;UBERON:0002203!3.05e-07!6;UBERON:0001768!3.05e-07!6;UBERON:0002616!4.88e-07!59 | |ontology_enrichment_uberon=UBERON:0004733!3.73e-28!12;UBERON:0002028!3.73e-28!12;UBERON:0007277!3.73e-28!12;UBERON:0002680!1.32e-26!9;UBERON:0001895!1.32e-26!9;UBERON:0010092!1.32e-26!9;UBERON:0002037!4.60e-26!6;UBERON:0006215!4.60e-26!6;UBERON:0004732!5.76e-26!13;UBERON:0003076!1.84e-22!15;UBERON:0003057!1.84e-22!15;UBERON:0001778!1.32e-13!3;UBERON:0001775!1.32e-13!3;UBERON:0002363!6.77e-11!1;UBERON:0007647!6.77e-11!1;UBERON:0010115!6.77e-11!1;UBERON:0002336!1.61e-10!1;UBERON:0001018!1.61e-10!1;UBERON:0002473!1.61e-10!1;UBERON:0005340!1.61e-10!1;UBERON:0002316!1.61e-10!1;UBERON:0003544!1.61e-10!1;UBERON:0001020!1.61e-10!1;UBERON:0005970!1.61e-10!1;UBERON:0002437!1.61e-10!1;UBERON:0000488!1.95e-10!4;UBERON:0003075!2.01e-09!86;UBERON:0007284!2.01e-09!86;UBERON:0002346!6.04e-09!90;UBERON:0001017!6.09e-08!82;UBERON:0005743!1.59e-07!86;UBERON:0001049!2.63e-07!57;UBERON:0005068!2.63e-07!57;UBERON:0006241!2.63e-07!57;UBERON:0007135!2.63e-07!57;UBERON:0002203!3.05e-07!6;UBERON:0001768!3.05e-07!6;UBERON:0002616!4.88e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.19e-12;6!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0002037;2.19e-12;6!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
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|short_description=p@chr3:112823266..112823272,- | |short_description=p@chr3:112823266..112823272,- | ||
}} | }} |
Latest revision as of 14:23, 29 July 2015
Short description: | p@chr3:112823266..112823272, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112823266..112823272, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 2.62e-23 | 3 |
embryonic stem cell | 1.83e-14 | 5 |
oligodendrocyte | 8.16e-11 | 7 |
macroglial cell | 8.16e-11 | 7 |
astrocyte | 8.16e-11 | 7 |
oligodendrocyte precursor cell | 8.16e-11 | 7 |
melanocyte | 6.56e-08 | 10 |
melanoblast | 6.56e-08 | 10 |
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |