FFCP PHASE1:Hg19::chr13:92150512..92150516,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:92150512..92150516,+ | |||
|description=CAGE_peak_at_chr13:92150512..92150516,+ | |description=CAGE_peak_at_chr13:92150512..92150516,+ | ||
|id=chr13:92150512..92150516,+ | |id=chr13:92150512..92150516,+ | ||
|ontology_enrichment_celltype=CL:0002150!6.80e-09!3;CL:0000861!6.80e-09!3 | |ontology_enrichment_celltype=CL:0002150!6.80e-09!3;CL:0000861!6.80e-09!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.28e-20!57;UBERON:0005068!4.28e-20!57;UBERON:0006241!4.28e-20!57;UBERON:0007135!4.28e-20!57;UBERON:0002780!5.69e-17!41;UBERON:0001890!5.69e-17!41;UBERON:0006240!5.69e-17!41;UBERON:0002020!8.91e-17!34;UBERON:0003528!8.91e-17!34;UBERON:0001893!9.93e-17!34;UBERON:0003080!1.89e-16!42;UBERON:0001869!5.29e-16!32;UBERON:0002616!6.97e-16!59;UBERON:0002791!2.53e-15!33;UBERON:0001017!6.36e-13!82;UBERON:0000955!1.95e-12!69;UBERON:0006238!1.95e-12!69;UBERON:0003075!3.27e-12!86;UBERON:0007284!3.27e-12!86;UBERON:0005743!5.12e-12!86;UBERON:0002346!2.27e-11!90;UBERON:0000073!2.85e-11!94;UBERON:0001016!2.85e-11!94;UBERON:0000956!3.62e-10!25;UBERON:0000203!3.62e-10!25;UBERON:0002619!5.49e-10!22;UBERON:0003056!8.00e-10!61;UBERON:0002308!9.08e-09!9;UBERON:0000125!9.08e-09!9;UBERON:0000349!2.45e-08!5;UBERON:0007023!1.32e-07!115;UBERON:0000988!2.13e-07!3;UBERON:0001950!4.29e-07!20 | |ontology_enrichment_uberon=UBERON:0001049!4.28e-20!57;UBERON:0005068!4.28e-20!57;UBERON:0006241!4.28e-20!57;UBERON:0007135!4.28e-20!57;UBERON:0002780!5.69e-17!41;UBERON:0001890!5.69e-17!41;UBERON:0006240!5.69e-17!41;UBERON:0002020!8.91e-17!34;UBERON:0003528!8.91e-17!34;UBERON:0001893!9.93e-17!34;UBERON:0003080!1.89e-16!42;UBERON:0001869!5.29e-16!32;UBERON:0002616!6.97e-16!59;UBERON:0002791!2.53e-15!33;UBERON:0001017!6.36e-13!82;UBERON:0000955!1.95e-12!69;UBERON:0006238!1.95e-12!69;UBERON:0003075!3.27e-12!86;UBERON:0007284!3.27e-12!86;UBERON:0005743!5.12e-12!86;UBERON:0002346!2.27e-11!90;UBERON:0000073!2.85e-11!94;UBERON:0001016!2.85e-11!94;UBERON:0000956!3.62e-10!25;UBERON:0000203!3.62e-10!25;UBERON:0002619!5.49e-10!22;UBERON:0003056!8.00e-10!61;UBERON:0002308!9.08e-09!9;UBERON:0000125!9.08e-09!9;UBERON:0000349!2.45e-08!5;UBERON:0007023!1.32e-07!115;UBERON:0000988!2.13e-07!3;UBERON:0001950!4.29e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.44e-21;2!UBERON:0002757;3.44e-21;2!UBERON:0010134;3.44e-21;2!UBERON:0005408;3.44e-21;2!UBERON:0001899;3.44e-21;2!UBERON:0003296;2.66e-11;4!UBERON:0010133;2.66e-11;4!UBERON:0002784;2.66e-11;4!UBERON:0001894;5.22e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001905;3.44e-21;2!UBERON:0002757;3.44e-21;2!UBERON:0010134;3.44e-21;2!UBERON:0005408;3.44e-21;2!UBERON:0001899;3.44e-21;2!UBERON:0003296;2.66e-11;4!UBERON:0010133;2.66e-11;4!UBERON:0002784;2.66e-11;4!UBERON:0001894;5.22e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.81e-21,2;UBERON:0002757,3.81e-21,2;UBERON:0010134,3.81e-21,2;UBERON:0005408,3.81e-21,2;UBERON:0001899,3.81e-21,2;UBERON:0003296,2.80e-11,4;UBERON:0010133,2.80e-11,4;UBERON:0002784,2.80e-11,4;UBERON:0001894,5.38e-07,7;UBERON:0006222,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.498635045700469,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.774050650312681,1.09633975629278,0.574808199372465,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,2.16082196982225,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.182248669974074,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,2.14280734351315,0,0,0,0,0.460935950223117,0,0.203909198930495,0.131545547125698,0,0,0,0.471346769748006,0,0,0,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.689486746482929,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0.498635045700469,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.774050650312681,1.09633975629278,0.574808199372465,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,2.16082196982225,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.182248669974074,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,2.14280734351315,0,0,0,0,0.460935950223117,0,0.203909198930495,0.131545547125698,0,0,0,0.471346769748006,0,0,0,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0.641136984606466 | ||
|short_description=p@chr13:92150512..92150516,+ | |short_description=p@chr13:92150512..92150516,+ | ||
}} | }} |
Latest revision as of 17:26, 24 July 2015
Short description: | p@chr13:92150512..92150516, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:92150512..92150516, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.81e-21 | 2 |
regional part of epithalamus | 3.81e-21 | 2 |
secretory circumventricular organ | 3.81e-21 | 2 |
circumventricular organ | 3.81e-21 | 2 |
epithalamus | 3.81e-21 | 2 |
gland of diencephalon | 2.80e-11 | 4 |
neuroendocrine gland | 2.80e-11 | 4 |
regional part of diencephalon | 2.80e-11 | 4 |
diencephalon | 5.38e-07 | 7 |
future diencephalon | 5.38e-07 | 7 |