FFCP PHASE1:Hg19::chr1:158323491..158323497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt=E7EP01,A2RRL5,P15812 | |UniProt=E7EP01,A2RRL5,P15812 | ||
|association_with_transcript=5bp_to_ENST00000444681,NM_001042583,NM_001042584,NM_001042585,NM_001042586,NM_001042587,NM_001185107,NM_001185108,NM_001185110,NM_001185112,NM_001185113,NM_001185114,NM_001185115,NM_030893_5end | |association_with_transcript=5bp_to_ENST00000444681,NM_001042583,NM_001042584,NM_001042585,NM_001042586,NM_001042587,NM_001185107,NM_001185108,NM_001185110,NM_001185112,NM_001185113,NM_001185114,NM_001185115,NM_030893_5end | ||
|cluster_id=chr1:158323491..158323497,+ | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_25_at_CD1E_5end | |description=CAGE_peak_25_at_CD1E_5end | ||
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|ontology_enrichment_celltype=CL:0000990!2.27e-22!8;CL:0000451!1.90e-18!10;CL:0000453!2.52e-18!5;CL:0000840!1.63e-15!5;CL:0001029!1.63e-15!5;CL:0001014!3.24e-12!2;CL:0001016!3.24e-12!2 | |ontology_enrichment_celltype=CL:0000990!2.27e-22!8;CL:0000451!1.90e-18!10;CL:0000453!2.52e-18!5;CL:0000840!1.63e-15!5;CL:0001029!1.63e-15!5;CL:0001014!3.24e-12!2;CL:0001016!3.24e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.04e-34;2 | |ontology_enrichment_celltype_v019=CL:0000047;5.04e-34;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.35e-09,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.60e-23!4;UBERON:0005058!4.60e-23!4;UBERON:0009113!4.60e-23!4;UBERON:0003295!4.60e-23!4;UBERON:0005562!4.60e-23!4;UBERON:0003351!9.74e-16!6;UBERON:0004177!1.23e-13!7;UBERON:0000974!7.74e-10!10;UBERON:0003408!7.74e-10!10;UBERON:0001042!7.74e-10!10;UBERON:0009145!7.74e-10!10;UBERON:0006562!5.00e-09!11;UBERON:0009722!5.00e-09!11;UBERON:0007690!5.00e-09!11;UBERON:0008814!7.41e-07!15 | |ontology_enrichment_uberon=UBERON:0002370!4.60e-23!4;UBERON:0005058!4.60e-23!4;UBERON:0009113!4.60e-23!4;UBERON:0003295!4.60e-23!4;UBERON:0005562!4.60e-23!4;UBERON:0003351!9.74e-16!6;UBERON:0004177!1.23e-13!7;UBERON:0000974!7.74e-10!10;UBERON:0003408!7.74e-10!10;UBERON:0001042!7.74e-10!10;UBERON:0009145!7.74e-10!10;UBERON:0006562!5.00e-09!11;UBERON:0009722!5.00e-09!11;UBERON:0007690!5.00e-09!11;UBERON:0008814!7.41e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.04e-34;2!UBERON:0005058;5.04e-34;2!UBERON:0009113;5.04e-34;2!UBERON:0004177;1.60e-14;5!UBERON:0005057;1.60e-14;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;5.04e-34;2!UBERON:0005058;5.04e-34;2!UBERON:0009113;5.04e-34;2!UBERON:0004177;1.60e-14;5!UBERON:0005057;1.60e-14;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0003351,2.74e-12,6;UBERON:0004177,9.89e-11,7;UBERON:0005057,9.89e-11,7;UBERON:0000974,6.56e-08,10;UBERON:0003408,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p25@CD1E | |short_description=p25@CD1E | ||
}} | }} |
Latest revision as of 20:58, 17 September 2015
Short description: | p25@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CD1E_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 5bp_to_ENST00000444681, NM_001042583, NM_001042584, NM_001042585, NM_001042586, NM_001042587, NM_001185107, NM_001185108, NM_001185110, NM_001185112, NM_001185113, NM_001185114, NM_001185115, NM_030893_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | E7EP01A2RRL5P15812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
pharyngeal epithelium | 2.74e-12 | 6 |
hemopoietic organ | 9.89e-11 | 7 |
immune organ | 9.89e-11 | 7 |
neck | 6.56e-08 | 10 |
gland of gut | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |