FFCP PHASE1:Hg19::chr16:87873350..87873383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87873350..87873383,+ | |||
|description=CAGE_peak_at_chr16:87873350..87873383,+ | |description=CAGE_peak_at_chr16:87873350..87873383,+ | ||
|id=chr16:87873350..87873383,+ | |id=chr16:87873350..87873383,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.50e-26!254;CL:0002076!2.27e-12!43;CL:0000223!9.60e-11!59;CL:0000548!1.72e-09!679;CL:0000004!1.72e-09!679;CL:0000255!1.72e-09!679;CL:0000012!2.89e-09!682;CL:0000063!3.03e-09!578;CL:0002368!5.46e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.50e-26!254;CL:0002076!2.27e-12!43;CL:0000223!9.60e-11!59;CL:0000548!1.72e-09!679;CL:0000004!1.72e-09!679;CL:0000255!1.72e-09!679;CL:0000012!2.89e-09!682;CL:0000063!3.03e-09!578;CL:0002368!5.46e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.43e-11;42!CL:0002368;4.73e-08;13!CL:0002251;2.00e-07;20!CL:0000075;4.81e-07;27 | |ontology_enrichment_celltype_v019=CL:0002076;1.43e-11;42!CL:0002368;4.73e-08;13!CL:0002251;2.00e-07;20!CL:0000075;4.81e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.28e-38,253;CL:0002076,1.67e-15,42;CL:0000223,8.21e-15,58;CL:0002368,3.51e-08,13;CL:0002251,2.56e-07,20;CL:0002077,4.08e-07,34;CL:0000075,6.59e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.29e-08;29!CL:0000223;1.04e-07;58 | |ontology_enrichment_development_v019=UBERON:0008947;7.29e-08;29!CL:0000223;1.04e-07;58 | ||
|ontology_enrichment_disease=DOID:305!4.39e-17!106;DOID:0050687!6.02e-17!143;DOID:162!1.63e-16!235;DOID:14566!1.66e-15!239 | |ontology_enrichment_disease=DOID:305!4.39e-17!106;DOID:0050687!6.02e-17!143;DOID:162!1.63e-16!235;DOID:14566!1.66e-15!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.64e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;9.64e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.96e-19,106;DOID:0050687,6.57e-16,143;DOID:162,3.80e-11,235;DOID:14566,1.77e-10,239;DOID:1749,5.44e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.83e-07!53;UBERON:0001737!1.85e-07!9;UBERON:0000072!5.71e-07!46;UBERON:0004119!9.03e-07!169;UBERON:0000925!9.03e-07!169;UBERON:0006595!9.03e-07!169 | |ontology_enrichment_uberon=UBERON:0000065!1.83e-07!53;UBERON:0001737!1.85e-07!9;UBERON:0000072!5.71e-07!46;UBERON:0004119!9.03e-07!169;UBERON:0000925!9.03e-07!169;UBERON:0006595!9.03e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.91e-12;9!UBERON:0001557;1.91e-12;9!UBERON:0000065;6.04e-09;44!UBERON:0000072;1.55e-08;37!UBERON:0005911;1.95e-08;36 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.91e-12;9!UBERON:0001557;1.91e-12;9!UBERON:0000065;6.04e-09;44!UBERON:0000072;1.55e-08;37!UBERON:0005911;1.95e-08;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.18e-12,9;UBERON:0001004,3.03e-12,74;UBERON:0000065,1.25e-11,54;UBERON:0000072,6.51e-11,47;UBERON:0001557,1.89e-10,19;UBERON:0008947,1.15e-09,38;UBERON:0003258,1.15e-09,38;UBERON:0004119,3.55e-09,160;UBERON:0000925,3.55e-09,160;UBERON:0006595,3.55e-09,160 | |||
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| ||
|short_description=p@chr16:87873350..87873383,+ | |short_description=p@chr16:87873350..87873383,+ | ||
}} | }} |
Latest revision as of 13:13, 25 July 2015
Short description: | p@chr16:87873350..87873383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87873350..87873383, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.28e-38 | 253 |
endo-epithelial cell | 1.67e-15 | 42 |
endodermal cell | 8.21e-15 | 58 |
respiratory epithelial cell | 3.51e-08 | 13 |
epithelial cell of alimentary canal | 2.56e-07 | 20 |
ecto-epithelial cell | 4.08e-07 | 34 |
columnar/cuboidal epithelial cell | 6.59e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.18e-12 | 9 |
respiratory system | 3.03e-12 | 74 |
respiratory tract | 1.25e-11 | 54 |
segment of respiratory tract | 6.51e-11 | 47 |
upper respiratory tract | 1.89e-10 | 19 |
respiratory primordium | 1.15e-09 | 38 |
endoderm of foregut | 1.15e-09 | 38 |
endoderm-derived structure | 3.55e-09 | 160 |
endoderm | 3.55e-09 | 160 |
presumptive endoderm | 3.55e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.96e-19 | 106 |
cell type cancer | 6.57e-16 | 143 |
cancer | 3.80e-11 | 235 |
disease of cellular proliferation | 1.77e-10 | 239 |
squamous cell carcinoma | 5.44e-08 | 14 |