FFCP PHASE1:Hg19::chr16:85969774..85969786,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85969774..85969786,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_at_chr16:85969774..85969786,- | |description=CAGE_peak_at_chr16:85969774..85969786,- | ||
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|ontology_enrichment_celltype=CL:0000037!5.36e-50!172;CL:0000566!5.36e-50!172;CL:0000738!9.08e-49!140;CL:0002087!2.34e-46!119;CL:0000988!4.19e-46!182;CL:0002032!7.32e-43!165;CL:0000837!7.32e-43!165;CL:0002031!4.43e-42!124;CL:0002057!1.95e-29!42;CL:0000945!1.96e-27!24;CL:0000826!1.96e-27!24;CL:0000860!6.74e-27!45;CL:0000838!4.69e-25!52;CL:0000542!2.06e-24!53;CL:0000051!2.06e-24!53;CL:0000236!1.91e-21!14;CL:0000557!3.99e-19!71;CL:0000763!7.07e-19!112;CL:0000049!7.07e-19!112;CL:0000766!7.67e-19!76;CL:0002009!1.26e-18!65;CL:0002194!4.71e-18!63;CL:0000576!4.71e-18!63;CL:0000040!4.71e-18!63;CL:0000559!4.71e-18!63;CL:0000839!1.11e-16!70;CL:0000134!3.82e-14!358;CL:0002320!1.69e-13!365;CL:0000219!3.07e-11!390;CL:0000034!2.48e-09!444;CL:0000048!1.36e-08!430;CL:0000723!3.17e-08!436;CL:0000784!1.02e-07!3;CL:0002393!2.14e-07!9;CL:0002397!2.14e-07!9;CL:0000623!3.91e-07!3;CL:0000825!3.91e-07!3;CL:0000767!5.30e-07!3 | |ontology_enrichment_celltype=CL:0000037!5.36e-50!172;CL:0000566!5.36e-50!172;CL:0000738!9.08e-49!140;CL:0002087!2.34e-46!119;CL:0000988!4.19e-46!182;CL:0002032!7.32e-43!165;CL:0000837!7.32e-43!165;CL:0002031!4.43e-42!124;CL:0002057!1.95e-29!42;CL:0000945!1.96e-27!24;CL:0000826!1.96e-27!24;CL:0000860!6.74e-27!45;CL:0000838!4.69e-25!52;CL:0000542!2.06e-24!53;CL:0000051!2.06e-24!53;CL:0000236!1.91e-21!14;CL:0000557!3.99e-19!71;CL:0000763!7.07e-19!112;CL:0000049!7.07e-19!112;CL:0000766!7.67e-19!76;CL:0002009!1.26e-18!65;CL:0002194!4.71e-18!63;CL:0000576!4.71e-18!63;CL:0000040!4.71e-18!63;CL:0000559!4.71e-18!63;CL:0000839!1.11e-16!70;CL:0000134!3.82e-14!358;CL:0002320!1.69e-13!365;CL:0000219!3.07e-11!390;CL:0000034!2.48e-09!444;CL:0000048!1.36e-08!430;CL:0000723!3.17e-08!436;CL:0000784!1.02e-07!3;CL:0002393!2.14e-07!9;CL:0002397!2.14e-07!9;CL:0000623!3.91e-07!3;CL:0000825!3.91e-07!3;CL:0000767!5.30e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.13e-52;13!CL:0000945;2.53e-32;24!CL:0000784;4.47e-18;3!CL:0000542;9.25e-16;53!CL:0002393;5.32e-09;6!CL:0002397;5.32e-09;6!CL:0002087;2.01e-08;104!CL:0000623;2.20e-08;3!CL:0000767;3.49e-08;3!CL:0002032;9.50e-07;1!CL:0000037;9.50e-07;1!CL:0001024;9.50e-07;1!CL:0000557;9.50e-07;1 | |ontology_enrichment_celltype_v019=CL:0000236;4.13e-52;13!CL:0000945;2.53e-32;24!CL:0000784;4.47e-18;3!CL:0000542;9.25e-16;53!CL:0002393;5.32e-09;6!CL:0002397;5.32e-09;6!CL:0002087;2.01e-08;104!CL:0000623;2.20e-08;3!CL:0000767;3.49e-08;3!CL:0002032;9.50e-07;1!CL:0000037;9.50e-07;1!CL:0001024;9.50e-07;1!CL:0000557;9.50e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.03e-48,14;CL:0000945,2.44e-32,24;CL:0000826,2.44e-32,24;CL:0000738,9.81e-27,136;CL:0000037,3.44e-26,168;CL:0000988,1.47e-24,177;CL:0002087,4.32e-23,115;CL:0002031,6.33e-22,120;CL:0002032,1.25e-21,161;CL:0000837,1.25e-21,161;CL:0000838,1.61e-21,52;CL:0000542,4.73e-21,53;CL:0000051,4.73e-21,53;CL:0000784,4.11e-18,3;CL:0000134,3.03e-09,354;CL:0002320,6.04e-09,361;CL:0000623,2.42e-08,3;CL:0000825,2.42e-08,3;CL:0000767,5.04e-08,3;CL:0000219,6.86e-08,386;CL:0000034,1.21e-07,441;CL:0000860,2.33e-07,42;CL:0002057,2.33e-07,42;CL:0000766,3.73e-07,72;CL:0001024,5.69e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;9.25e-16;53 | |ontology_enrichment_development_v019=CL:0000051;9.25e-16;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.12e-27!102;UBERON:0003061!4.12e-27!102;UBERON:0002193!1.88e-26!112;UBERON:0002371!2.25e-17!80;UBERON:0002405!9.15e-16!115;UBERON:0001474!1.57e-15!86;UBERON:0002384!1.28e-12!375;UBERON:0004765!6.48e-12!101;UBERON:0001434!6.48e-12!101;UBERON:0003081!1.20e-07!216;UBERON:0000178!6.80e-07!15;UBERON:0000179!6.80e-07!15;UBERON:0000463!6.80e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!4.12e-27!102;UBERON:0003061!4.12e-27!102;UBERON:0002193!1.88e-26!112;UBERON:0002371!2.25e-17!80;UBERON:0002405!9.15e-16!115;UBERON:0001474!1.57e-15!86;UBERON:0002384!1.28e-12!375;UBERON:0004765!6.48e-12!101;UBERON:0001434!6.48e-12!101;UBERON:0003081!1.20e-07!216;UBERON:0000178!6.80e-07!15;UBERON:0000179!6.80e-07!15;UBERON:0000463!6.80e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;9.50e-07;1!UBERON:0001961;9.50e-07;1!UBERON:0001744;9.50e-07;1!UBERON:0001042;9.50e-07;1!UBERON:0001735;9.50e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;9.50e-07;1!UBERON:0001961;9.50e-07;1!UBERON:0001744;9.50e-07;1!UBERON:0001042;9.50e-07;1!UBERON:0001735;9.50e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.55e-08,371;UBERON:0002372,8.02e-07,1;UBERON:0001961,8.02e-07,1;UBERON:0001744,8.02e-07,1;UBERON:0001735,8.02e-07,1;UBERON:0002371,9.95e-07,76 | |||
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|short_description=p@chr16:85969774..85969786,- | |short_description=p@chr16:85969774..85969786,- | ||
}} | }} |
Latest revision as of 13:05, 25 July 2015
Short description: | p@chr16:85969774..85969786, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85969774..85969786, - |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.03e-48 | 14 |
lymphocyte of B lineage | 2.44e-32 | 24 |
pro-B cell | 2.44e-32 | 24 |
leukocyte | 9.81e-27 | 136 |
hematopoietic stem cell | 3.44e-26 | 168 |
hematopoietic cell | 1.47e-24 | 177 |
nongranular leukocyte | 4.32e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 6.33e-22 | 120 |
hematopoietic oligopotent progenitor cell | 1.25e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-21 | 161 |
lymphoid lineage restricted progenitor cell | 1.61e-21 | 52 |
lymphocyte | 4.73e-21 | 53 |
common lymphoid progenitor | 4.73e-21 | 53 |
plasmacytoid dendritic cell | 4.11e-18 | 3 |
mesenchymal cell | 3.03e-09 | 354 |
connective tissue cell | 6.04e-09 | 361 |
natural killer cell | 2.42e-08 | 3 |
pro-NK cell | 2.42e-08 | 3 |
basophil | 5.04e-08 | 3 |
motile cell | 6.86e-08 | 386 |
stem cell | 1.21e-07 | 441 |
classical monocyte | 2.33e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-07 | 42 |
myeloid leukocyte | 3.73e-07 | 72 |
CD34-positive, CD38-negative hematopoietic stem cell | 5.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.55e-08 | 371 |
tonsil | 8.02e-07 | 1 |
mucosa-associated lymphoid tissue | 8.02e-07 | 1 |
lymphoid tissue | 8.02e-07 | 1 |
tonsillar ring | 8.02e-07 | 1 |
bone marrow | 9.95e-07 | 76 |