FFCP PHASE1:Hg19::chr2:131058236..131058275,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:131058236..131058275,- | |||
|coexpression_cluster_id=C267 | |coexpression_cluster_id=C267 | ||
|description=CAGE_peak_at_chr2:131058236..131058275,- | |description=CAGE_peak_at_chr2:131058236..131058275,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002553!5.79e-10!1;CL:0002557!1.48e-09!1 | |ontology_enrichment_celltype=CL:0002553!5.79e-10!1;CL:0002557!1.48e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;9.85e-34;1!CL:0000083;1.12e-09;4!CL:0000082;6.15e-08;19 | |ontology_enrichment_celltype_v019=CL:0002553;9.85e-34;1!CL:0000083;1.12e-09;4!CL:0000082;6.15e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,9.85e-34,1;CL:0000083,1.12e-09,4;CL:0000082,6.15e-08,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!3.74e-10!1;DOID:10165!3.74e-10!1;DOID:1798!3.74e-10!1;DOID:0060085!1.06e-09!1;DOID:3165!1.06e-09!1;DOID:0060121!1.06e-09!1;DOID:2438!1.06e-09!1;DOID:4418!1.06e-09!1;DOID:1115!5.39e-07!20 | |ontology_enrichment_disease=DOID:1799!3.74e-10!1;DOID:10165!3.74e-10!1;DOID:1798!3.74e-10!1;DOID:0060085!1.06e-09!1;DOID:3165!1.06e-09!1;DOID:0060121!1.06e-09!1;DOID:2438!1.06e-09!1;DOID:4418!1.06e-09!1;DOID:1115!5.39e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.84e-34;1!DOID:10165;1.84e-34;1!DOID:1798;1.84e-34;1!DOID:1115;1.66e-15;20!DOID:1324;8.46e-10;15!DOID:1793;1.12e-09;4!DOID:5409;1.22e-09;4!DOID:0050615;3.01e-09;16!DOID:170;7.17e-07;6 | |ontology_enrichment_disease_v019=DOID:1799;1.84e-34;1!DOID:10165;1.84e-34;1!DOID:1798;1.84e-34;1!DOID:1115;1.66e-15;20!DOID:1324;8.46e-10;15!DOID:1793;1.12e-09;4!DOID:5409;1.22e-09;4!DOID:0050615;3.01e-09;16!DOID:170;7.17e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,1.84e-34,1;DOID:10165,1.84e-34,1;DOID:1798,1.84e-34,1;DOID:1115,1.66e-15,20;DOID:1324,8.46e-10,15;DOID:1793,1.12e-09,4;DOID:5409,1.22e-09,4;DOID:0050615,3.01e-09,16;DOID:0050687,1.02e-08,143;DOID:170,7.17e-07,6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.15e-08;19!UBERON:0000115;6.15e-08;19!UBERON:0002048;5.57e-07;22!UBERON:0004807;5.57e-07;22!UBERON:0000117;5.57e-07;22!UBERON:0000171;5.57e-07;22!UBERON:0000170;5.57e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004802;6.15e-08;19!UBERON:0000115;6.15e-08;19!UBERON:0002048;5.57e-07;22!UBERON:0004807;5.57e-07;22!UBERON:0000117;5.57e-07;22!UBERON:0000171;5.57e-07;22!UBERON:0000170;5.57e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.15e-08,19;UBERON:0000115,6.15e-08,19;UBERON:0002048,5.57e-07,22;UBERON:0000117,5.57e-07,22;UBERON:0000171,5.57e-07,22;UBERON:0000170,5.57e-07,22;UBERON:0005597,5.57e-07,22;UBERON:0000118,5.57e-07,22 | |||
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|short_description=p@chr2:131058236..131058275,- | |short_description=p@chr2:131058236..131058275,- | ||
}} | }} |
Latest revision as of 00:16, 29 July 2015
Short description: | p@chr2:131058236..131058275, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:131058236..131058275, - |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 9.85e-34 | 1 |
epithelial cell of pancreas | 1.12e-09 | 4 |
epithelial cell of lung | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.15e-08 | 19 |
lung epithelium | 6.15e-08 | 19 |
lung | 5.57e-07 | 22 |
respiratory tube | 5.57e-07 | 22 |
respiration organ | 5.57e-07 | 22 |
pair of lungs | 5.57e-07 | 22 |
lung primordium | 5.57e-07 | 22 |
lung bud | 5.57e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.84e-34 | 1 |
endocrine pancreas cancer | 1.84e-34 | 1 |
pancreatic endocrine carcinoma | 1.84e-34 | 1 |
sarcoma | 1.66e-15 | 20 |
lung cancer | 8.46e-10 | 15 |
pancreatic cancer | 1.12e-09 | 4 |
lung small cell carcinoma | 1.22e-09 | 4 |
respiratory system cancer | 3.01e-09 | 16 |
cell type cancer | 1.02e-08 | 143 |
endocrine gland cancer | 7.17e-07 | 6 |