FFCP PHASE1:Hg19::chr1:94147385..94147407,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8412 | |EntrezGene=8412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=973 | |HGNC=973 | ||
|TSSclassifier=strong | |||
|UniProt=O75815 | |UniProt=O75815 | ||
|association_with_transcript=0bp_to_ENST00000260502,NM_003567,uc001dqa.2_5end | |association_with_transcript=0bp_to_ENST00000260502,NM_003567,uc001dqa.2_5end | ||
|cluster_id=chr1:94147385..94147407,- | |||
|description=CAGE_peak_1_at_BCAR3_5end | |description=CAGE_peak_1_at_BCAR3_5end | ||
|id=chr1:94147385..94147407,- | |id=chr1:94147385..94147407,- | ||
|ontology_enrichment_celltype=CL:0000066!9.01e-22!254;CL:0000220!4.50e-18!246;CL:0002321!1.65e-17!248;CL:0000548!5.40e-15!679;CL:0000004!5.40e-15!679;CL:0000255!5.40e-15!679;CL:0000012!3.50e-14!682;CL:0000222!1.78e-13!119;CL:0000076!1.23e-10!62;CL:0000144!3.65e-10!625;CL:0000213!1.23e-08!57;CL:0000215!1.23e-08!57;CL:0000063!1.46e-08!578;CL:0000055!1.69e-08!180;CL:0002371!2.05e-08!591;CL:0000003!2.12e-07!722 | |ontology_enrichment_celltype=CL:0000066!9.01e-22!254;CL:0000220!4.50e-18!246;CL:0002321!1.65e-17!248;CL:0000548!5.40e-15!679;CL:0000004!5.40e-15!679;CL:0000255!5.40e-15!679;CL:0000012!3.50e-14!682;CL:0000222!1.78e-13!119;CL:0000076!1.23e-10!62;CL:0000144!3.65e-10!625;CL:0000213!1.23e-08!57;CL:0000215!1.23e-08!57;CL:0000063!1.46e-08!578;CL:0000055!1.69e-08!180;CL:0002371!2.05e-08!591;CL:0000003!2.12e-07!722 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.88e-22,253;CL:0002321,1.45e-17,250;CL:0000222,1.64e-13,121;CL:0000076,1.97e-10,63;CL:0000213,6.60e-09,58;CL:0000215,6.60e-09,58;CL:0002078,9.64e-07,45 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!4.58e-18!625;UBERON:0000480!8.97e-18!626;UBERON:0000468!2.32e-16!659;UBERON:0000062!1.40e-10!511;UBERON:0000923!1.93e-10!604;UBERON:0005291!1.93e-10!604;UBERON:0006598!1.93e-10!604;UBERON:0002532!1.93e-10!604;UBERON:0002050!2.11e-10!605;UBERON:0005423!2.11e-10!605;UBERON:0003914!4.49e-10!118;UBERON:0000475!1.47e-09!365;UBERON:0000922!1.85e-09!612;UBERON:0004872!2.31e-09!84;UBERON:0000926!2.45e-09!448;UBERON:0004120!2.45e-09!448;UBERON:0006603!2.45e-09!448;UBERON:0002049!3.23e-09!79;UBERON:0007798!3.23e-09!79;UBERON:0000483!3.28e-09!309;UBERON:0000119!4.27e-09!312;UBERON:0002100!3.43e-08!216;UBERON:0001981!5.19e-08!60;UBERON:0007500!5.19e-08!60;UBERON:0004537!5.19e-08!60;UBERON:0006965!5.19e-08!60;UBERON:0000055!6.07e-08!69;UBERON:0005631!7.78e-08!14;UBERON:0000158!7.78e-08!14;UBERON:0003102!8.56e-08!95;UBERON:0004111!2.85e-07!241;UBERON:0005256!5.18e-07!143;UBERON:0001637!5.31e-07!42;UBERON:0003509!5.31e-07!42;UBERON:0004572!5.31e-07!42 | |ontology_enrichment_uberon=UBERON:0000467!4.58e-18!625;UBERON:0000480!8.97e-18!626;UBERON:0000468!2.32e-16!659;UBERON:0000062!1.40e-10!511;UBERON:0000923!1.93e-10!604;UBERON:0005291!1.93e-10!604;UBERON:0006598!1.93e-10!604;UBERON:0002532!1.93e-10!604;UBERON:0002050!2.11e-10!605;UBERON:0005423!2.11e-10!605;UBERON:0003914!4.49e-10!118;UBERON:0000475!1.47e-09!365;UBERON:0000922!1.85e-09!612;UBERON:0004872!2.31e-09!84;UBERON:0000926!2.45e-09!448;UBERON:0004120!2.45e-09!448;UBERON:0006603!2.45e-09!448;UBERON:0002049!3.23e-09!79;UBERON:0007798!3.23e-09!79;UBERON:0000483!3.28e-09!309;UBERON:0000119!4.27e-09!312;UBERON:0002100!3.43e-08!216;UBERON:0001981!5.19e-08!60;UBERON:0007500!5.19e-08!60;UBERON:0004537!5.19e-08!60;UBERON:0006965!5.19e-08!60;UBERON:0000055!6.07e-08!69;UBERON:0005631!7.78e-08!14;UBERON:0000158!7.78e-08!14;UBERON:0003102!8.56e-08!95;UBERON:0004111!2.85e-07!241;UBERON:0005256!5.18e-07!143;UBERON:0001637!5.31e-07!42;UBERON:0003509!5.31e-07!42;UBERON:0004572!5.31e-07!42 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.75e-10,117;UBERON:0004872,4.60e-09,83;UBERON:0002049,6.11e-09,78;UBERON:0007798,6.11e-09,78;UBERON:0000483,6.61e-09,306;UBERON:0000119,8.57e-09,309;UBERON:0003102,1.72e-08,99;UBERON:0005631,7.61e-08,14;UBERON:0000158,7.61e-08,14;UBERON:0000922,8.13e-08,592;UBERON:0007500,9.95e-08,59;UBERON:0001981,9.95e-08,59;UBERON:0004537,9.95e-08,59;UBERON:0006965,9.95e-08,59;UBERON:0000055,1.13e-07,68;UBERON:0002100,1.17e-07,199;UBERON:0005423,1.86e-07,581;UBERON:0004111,3.25e-07,240;UBERON:0001637,5.21e-07,42;UBERON:0003509,5.21e-07,42;UBERON:0004572,5.21e-07,42 | |||
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| ||
|short_description=p1@BCAR3 | |short_description=p1@BCAR3 | ||
}} | }} |
Latest revision as of 21:57, 19 September 2015
Short description: | p1@BCAR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BCAR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000260502, NM_003567, uc001dqa.2_5end |
EntrezGene: | BCAR3 |
HGNC: | 973 |
UniProt: | O75815 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.88e-22 | 253 |
embryonic cell | 1.45e-17 | 250 |
mesodermal cell | 1.64e-13 | 121 |
squamous epithelial cell | 1.97e-10 | 63 |
lining cell | 6.60e-09 | 58 |
barrier cell | 6.60e-09 | 58 |
meso-epithelial cell | 9.64e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.75e-10 | 117 |
splanchnic layer of lateral plate mesoderm | 4.60e-09 | 83 |
vasculature | 6.11e-09 | 78 |
vascular system | 6.11e-09 | 78 |
epithelium | 6.61e-09 | 306 |
cell layer | 8.57e-09 | 309 |
surface structure | 1.72e-08 | 99 |
extraembryonic membrane | 7.61e-08 | 14 |
membranous layer | 7.61e-08 | 14 |
embryo | 8.13e-08 | 592 |
epithelial tube open at both ends | 9.95e-08 | 59 |
blood vessel | 9.95e-08 | 59 |
blood vasculature | 9.95e-08 | 59 |
vascular cord | 9.95e-08 | 59 |
vessel | 1.13e-07 | 68 |
trunk | 1.17e-07 | 199 |
developing anatomical structure | 1.86e-07 | 581 |
anatomical conduit | 3.25e-07 | 240 |
artery | 5.21e-07 | 42 |
arterial blood vessel | 5.21e-07 | 42 |
arterial system | 5.21e-07 | 42 |