FFCP PHASE1:Hg19::chr16:19533384..19533403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51573 | |EntrezGene=51573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29644 | |HGNC=29644 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZC3 | |UniProt=Q9NZC3 | ||
|association_with_transcript=46bp_to_ENST00000353258,NM_016641,uc002dgh.2,uc002dgi.2_5end | |association_with_transcript=46bp_to_ENST00000353258,NM_016641,uc002dgh.2,uc002dgi.2_5end | ||
|cluster_id=chr16:19533384..19533403,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_3_at_GDE1_5end | |description=CAGE_peak_3_at_GDE1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!2.56e-08!254 | |ontology_enrichment_celltype=CL:0000066!2.56e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.57e-07;13 | |ontology_enrichment_celltype_v019=CL:0000136;3.57e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.26e-08,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.26e-11!241;UBERON:0000477!3.67e-10!286;UBERON:0000480!5.08e-09!626;UBERON:0000467!5.94e-09!625;UBERON:0000025!8.10e-09!194;UBERON:0000481!1.09e-08!347;UBERON:0000923!1.80e-08!604;UBERON:0005291!1.80e-08!604;UBERON:0006598!1.80e-08!604;UBERON:0002532!1.80e-08!604;UBERON:0000483!1.97e-08!309;UBERON:0000119!2.25e-08!312;UBERON:0002050!2.56e-08!605;UBERON:0005423!2.56e-08!605;UBERON:0000468!9.07e-08!659;UBERON:0000922!1.12e-07!612;UBERON:0000475!2.22e-07!365;UBERON:0000064!3.16e-07!219;UBERON:0002100!7.68e-07!216 | |ontology_enrichment_uberon=UBERON:0004111!1.26e-11!241;UBERON:0000477!3.67e-10!286;UBERON:0000480!5.08e-09!626;UBERON:0000467!5.94e-09!625;UBERON:0000025!8.10e-09!194;UBERON:0000481!1.09e-08!347;UBERON:0000923!1.80e-08!604;UBERON:0005291!1.80e-08!604;UBERON:0006598!1.80e-08!604;UBERON:0002532!1.80e-08!604;UBERON:0000483!1.97e-08!309;UBERON:0000119!2.25e-08!312;UBERON:0002050!2.56e-08!605;UBERON:0005423!2.56e-08!605;UBERON:0000468!9.07e-08!659;UBERON:0000922!1.12e-07!612;UBERON:0000475!2.22e-07!365;UBERON:0000064!3.16e-07!219;UBERON:0002100!7.68e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,8.02e-12,240;UBERON:0000025,6.79e-09,192;UBERON:0000483,2.59e-08,306;UBERON:0000119,2.95e-08,309;UBERON:0005423,2.46e-07,581;UBERON:0011216,2.58e-07,223 | |||
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| ||
|short_description=p3@GDE1 | |short_description=p3@GDE1 | ||
}} | }} |
Latest revision as of 23:58, 24 September 2015
Short description: | p3@GDE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDE1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 46bp_to_ENST00000353258, NM_016641, uc002dgh.2, uc002dgi.2_5end |
EntrezGene: | GDE1 |
HGNC: | 29644 |
UniProt: | Q9NZC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.26e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 8.02e-12 | 240 |
tube | 6.79e-09 | 192 |
epithelium | 2.59e-08 | 306 |
cell layer | 2.95e-08 | 309 |
developing anatomical structure | 2.46e-07 | 581 |
organ system subdivision | 2.58e-07 | 223 |