FFCP PHASE1:Hg19::chr1:28286550..28286561,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55113 | |EntrezGene=55113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25508 | |HGNC=25508 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6D3 | |UniProt=Q9H6D3 | ||
|association_with_transcript=46bp_to_NM_018053,uc001bph.1_5end | |association_with_transcript=46bp_to_NM_018053,uc001bph.1_5end | ||
|cluster_id=chr1:28286550..28286561,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_XKR8_5end | |description=CAGE_peak_4_at_XKR8_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.07e-11!42;CL:0000860!2.77e-10!45;CL:0000738!3.52e-10!140;CL:0000766!9.63e-10!76;CL:0000094!1.02e-09!8;CL:0000037!7.97e-08!172;CL:0000566!7.97e-08!172;CL:0002087!1.01e-07!119;CL:0002393!5.44e-07!9;CL:0002397!5.44e-07!9;CL:0002009!6.13e-07!65 | |ontology_enrichment_celltype=CL:0002057!1.07e-11!42;CL:0000860!2.77e-10!45;CL:0000738!3.52e-10!140;CL:0000766!9.63e-10!76;CL:0000094!1.02e-09!8;CL:0000037!7.97e-08!172;CL:0000566!7.97e-08!172;CL:0002087!1.01e-07!119;CL:0002393!5.44e-07!9;CL:0002397!5.44e-07!9;CL:0002009!6.13e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.36e-49;8!CL:0000081;1.01e-35;11!CL:0000775;8.11e-26;3!CL:0000771;1.16e-17;2!CL:0000226;2.08e-11;3!CL:0000767;2.08e-11;3!CL:0000842;2.08e-11;3!CL:0002032;3.53e-09;1!CL:0000557;3.53e-09;1!CL:0000766;6.95e-08;69!CL:0000860;2.45e-07;33!CL:0002057;2.45e-07;33!CL:0000763;2.92e-07;100 | |ontology_enrichment_celltype_v019=CL:0000094;2.36e-49;8!CL:0000081;1.01e-35;11!CL:0000775;8.11e-26;3!CL:0000771;1.16e-17;2!CL:0000226;2.08e-11;3!CL:0000767;2.08e-11;3!CL:0000842;2.08e-11;3!CL:0002032;3.53e-09;1!CL:0000557;3.53e-09;1!CL:0000766;6.95e-08;69!CL:0000860;2.45e-07;33!CL:0002057;2.45e-07;33!CL:0000763;2.92e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.19e-49,8;CL:0000081,1.78e-35,11;CL:0000775,8.13e-26,3;CL:0000766,4.32e-19,72;CL:0000771,1.16e-17,2;CL:0000763,7.33e-14,108;CL:0000049,7.33e-14,108;CL:0000738,7.97e-14,136;CL:0000037,4.18e-12,168;CL:0000226,2.19e-11,3;CL:0000842,2.19e-11,3;CL:0000988,2.50e-11,177;CL:0000767,3.71e-11,3;CL:0002032,9.10e-10,161;CL:0000837,9.10e-10,161;CL:0000860,1.50e-08,42;CL:0002057,1.50e-08,42;CL:0000473,2.20e-07,48;CL:0000234,2.20e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000049;3.88e-07;108 | |ontology_enrichment_development_v019=CL:0000049;3.88e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;3.53e-09;1!DOID:3149;3.53e-09;1 | |ontology_enrichment_disease_v019=DOID:3151;3.53e-09;1!DOID:3149;3.53e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,3.53e-09,1;DOID:3149,3.53e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.65e-09!112;UBERON:0002390!4.05e-09!102;UBERON:0003061!4.05e-09!102 | |ontology_enrichment_uberon=UBERON:0002193!2.65e-09!112;UBERON:0002390!4.05e-09!102;UBERON:0003061!4.05e-09!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.73e-19;15!UBERON:0000179;6.73e-19;15!UBERON:0000463;6.73e-19;15!UBERON:0002390;4.03e-11;32!UBERON:0002193;8.61e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.73e-19;15!UBERON:0000179;6.73e-19;15!UBERON:0000463;6.73e-19;15!UBERON:0002390;4.03e-11;32!UBERON:0002193;8.61e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.85e-19,15;UBERON:0000179,6.85e-19,15;UBERON:0000463,6.85e-19,15;UBERON:0002390,2.74e-13,98;UBERON:0003061,2.74e-13,98;UBERON:0002193,7.69e-12,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.23852898652861,0,0,0,0,0,0.293600439334847,0.553995408531877,0.802177789880567,0.868043482863407,0,0.647787332037959,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0.863077176966451,0.768482119587302,1.89185783910868,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0,0,0,0,3.62836430205388,2.59302754908121,2.13112375266347,0,0.56738522469114,0,1.50749199154046,0.521482918420201,0.65156653411535,0,0,0,0.845021145247767,0.425208599930087,1.25795187305026,0.786300418025466,0.750884464207532,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0.318565414324097,0.651083453856419,0,0.752875595388864,0.127986611154418,0,0.710331756132051,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0.183201743930407,6.58902087180316,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.448346041655403,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.375355559615893,0.554128230968366,0.438977620880838,0,0,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0.348581828608555,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0.646882724578552,0.77005821767849,0,0,0,0,0.637938751653163,14.2311334549965,8.97484377612075,12.018049889645,0,0,0,0,0.356857977594324,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,1.24060815673732,1.50999940573032,0.320182673410333,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0,0,0,0,2.53723804616085,0,0.569647187174163,0.476463550915578,2.46817363851717,0.648473311192717,0,3.96562588147135,0,0,0,0,0,0.142283686696828,0,0.399158742865633,0.383010740264733,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0.0607495566580247,1.34173875039706,0,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0,0,0,0.58620893471233,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0.308801447160972,0,0.353378291891762,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0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| ||
|short_description=p4@XKR8 | |short_description=p4@XKR8 | ||
}} | }} |
Latest revision as of 09:22, 17 September 2015
Short description: | p4@XKR8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_XKR8_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 46bp_to_NM_018053, uc001bph.1_5end |
EntrezGene: | XKR8 |
HGNC: | 25508 |
UniProt: | Q9H6D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.19e-49 | 8 |
blood cell | 1.78e-35 | 11 |
neutrophil | 8.13e-26 | 3 |
myeloid leukocyte | 4.32e-19 | 72 |
eosinophil | 1.16e-17 | 2 |
myeloid cell | 7.33e-14 | 108 |
common myeloid progenitor | 7.33e-14 | 108 |
leukocyte | 7.97e-14 | 136 |
hematopoietic stem cell | 4.18e-12 | 168 |
single nucleate cell | 2.19e-11 | 3 |
mononuclear cell | 2.19e-11 | 3 |
hematopoietic cell | 2.50e-11 | 177 |
basophil | 3.71e-11 | 3 |
hematopoietic oligopotent progenitor cell | 9.10e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.10e-10 | 161 |
classical monocyte | 1.50e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-08 | 42 |
defensive cell | 2.20e-07 | 48 |
phagocyte | 2.20e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 6.85e-19 | 15 |
haemolymphatic fluid | 6.85e-19 | 15 |
organism substance | 6.85e-19 | 15 |
hematopoietic system | 2.74e-13 | 98 |
blood island | 2.74e-13 | 98 |
hemolymphoid system | 7.69e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.53e-09 | 1 |
keratoacanthoma | 3.53e-09 | 1 |