FFCP PHASE1:Hg19::chr1:63787296..63787311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_ENST00000426393_5end | |association_with_transcript=-96bp_to_ENST00000426393_5end | ||
|cluster_id=chr1:63787296..63787311,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_1_at_ENST00000426393_5end | |description=CAGE_peak_1_at_ENST00000426393_5end | ||
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|ontology_enrichment_celltype=CL:0002322!1.61e-61!5;CL:0000039!5.90e-29!7;CL:0000586!5.90e-29!7;CL:0000148!6.53e-20!10;CL:0000541!6.53e-20!10;CL:0000540!8.56e-20!6;CL:0000031!8.56e-20!6;CL:0000404!8.56e-20!6;CL:0000047!5.24e-15!8;CL:0000147!2.56e-14!14;CL:0000710!4.20e-10!20;CL:0000133!1.84e-09!59;CL:0000221!8.37e-08!71;CL:0000075!1.54e-07!27 | |ontology_enrichment_celltype=CL:0002322!1.61e-61!5;CL:0000039!5.90e-29!7;CL:0000586!5.90e-29!7;CL:0000148!6.53e-20!10;CL:0000541!6.53e-20!10;CL:0000540!8.56e-20!6;CL:0000031!8.56e-20!6;CL:0000404!8.56e-20!6;CL:0000047!5.24e-15!8;CL:0000147!2.56e-14!14;CL:0000710!4.20e-10!20;CL:0000133!1.84e-09!59;CL:0000221!8.37e-08!71;CL:0000075!1.54e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.24e-75;5!CL:0000039;3.07e-35;7!CL:0000586;3.07e-35;7!CL:0002321;3.48e-25;15!CL:0000540;5.31e-24;6!CL:0000404;5.31e-24;6!CL:0000148;3.59e-14;10!CL:0000147;2.67e-10;14!CL:0000710;2.24e-07;20 | |ontology_enrichment_celltype_v019=CL:0002322;5.24e-75;5!CL:0000039;3.07e-35;7!CL:0000586;3.07e-35;7!CL:0002321;3.48e-25;15!CL:0000540;5.31e-24;6!CL:0000404;5.31e-24;6!CL:0000148;3.59e-14;10!CL:0000147;2.67e-10;14!CL:0000710;2.24e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.66e-75,5;CL:0000039,3.07e-35,7;CL:0000586,3.07e-35,7;CL:0000540,5.31e-24,6;CL:0000031,5.31e-24,6;CL:0000404,5.31e-24,6;CL:0000047,3.51e-18,8;CL:0000148,3.67e-14,10;CL:0000541,3.67e-14,10;CL:0000147,2.71e-10,14;CL:0000133,8.22e-09,59;CL:0000710,2.26e-07,20;CL:0000221,3.27e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.18e-25;10!UBERON:0005564;8.18e-25;10!CL:0000031;5.31e-24;6 | |ontology_enrichment_development_v019=UBERON:0009117;8.18e-25;10!UBERON:0005564;8.18e-25;10!CL:0000031;5.31e-24;6 | ||
|ontology_enrichment_disease=DOID:3095!3.84e-14!22;DOID:2994!3.84e-14!22 | |ontology_enrichment_disease=DOID:3095!3.84e-14!22;DOID:2994!3.84e-14!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.78e-11;22!DOID:2994;1.78e-11;22 | |ontology_enrichment_disease_v019=DOID:3095;1.78e-11;22!DOID:2994;1.78e-11;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.78e-11,22;DOID:2994,1.78e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.18e-25!8;UBERON:0003135!1.45e-18!11;UBERON:0000991!7.48e-10!21;UBERON:0009196!7.48e-10!21;UBERON:0009117!7.48e-10!21;UBERON:0005564!7.48e-10!21;UBERON:0004176!2.05e-09!22;UBERON:0003101!2.05e-09!22;UBERON:0000079!2.05e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!2.18e-25!8;UBERON:0003135!1.45e-18!11;UBERON:0000991!7.48e-10!21;UBERON:0009196!7.48e-10!21;UBERON:0009117!7.48e-10!21;UBERON:0005564!7.48e-10!21;UBERON:0004176!2.05e-09!22;UBERON:0003101!2.05e-09!22;UBERON:0000079!2.05e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.73e-31;8!UBERON:0003135;1.34e-22;11!UBERON:0000922;2.89e-15;49!UBERON:0000991;5.22e-12;21!UBERON:0003101;1.78e-11;22!UBERON:0000079;1.78e-11;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.73e-31;8!UBERON:0003135;1.34e-22;11!UBERON:0000922;2.89e-15;49!UBERON:0000991;5.22e-12;21!UBERON:0003101;1.78e-11;22!UBERON:0000079;1.78e-11;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.73e-31,8;UBERON:0003135,1.34e-22,11;UBERON:0000991,5.22e-12,21;UBERON:0009196,5.22e-12,21;UBERON:0009117,5.22e-12,21;UBERON:0005564,5.22e-12,21;UBERON:0004176,1.78e-11,22;UBERON:0003101,1.78e-11,22;UBERON:0000079,1.78e-11,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0521085071801,11.3975600756477,14.1756610300812,9.1221728413526,6.56034212276634,9.48941133597158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,38.2592493346746,42.7747647817397,44.867556507152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,28.046928179045,17.9035661527926,40.8013353934711,10.5297166502798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0521085071801,11.3975600756477,14.1756610300812,9.1221728413526,6.56034212276634,9.48941133597158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,38.2592493346746,42.7747647817397,44.867556507152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,28.046928179045,17.9035661527926,40.8013353934711,10.5297166502798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000426393 | |short_description=p1@ENST00000426393 | ||
}} | }} |
Latest revision as of 09:39, 28 July 2015
Short description: | p1@ENST00000426393 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000426393_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -96bp_to_ENST00000426393_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.66e-75 | 5 |
germ line cell | 3.07e-35 | 7 |
germ cell | 3.07e-35 | 7 |
neuron | 5.31e-24 | 6 |
neuroblast | 5.31e-24 | 6 |
electrically signaling cell | 5.31e-24 | 6 |
neuronal stem cell | 3.51e-18 | 8 |
melanocyte | 3.67e-14 | 10 |
melanoblast | 3.67e-14 | 10 |
pigment cell | 2.71e-10 | 14 |
neurectodermal cell | 8.22e-09 | 59 |
neurecto-epithelial cell | 2.26e-07 | 20 |
ectodermal cell | 3.27e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 6.73e-31 | 8 |
male reproductive organ | 1.34e-22 | 11 |
gonad | 5.22e-12 | 21 |
indifferent external genitalia | 5.22e-12 | 21 |
indifferent gonad | 5.22e-12 | 21 |
gonad primordium | 5.22e-12 | 21 |
external genitalia | 1.78e-11 | 22 |
male organism | 1.78e-11 | 22 |
male reproductive system | 1.78e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.78e-11 | 22 |
germ cell cancer | 1.78e-11 | 22 |